Similar regions between promoters of yqgP
>>>>>>>>>>>>>>>>>>>>>>> sub AGGTAGAATAACAAACCCTATTGGCAGGAGGGATATCATGAAAAAACTTTTGATATATGC hal ....AGGATAACGAAC.......................................TATGC ste .............AGCCATCTGAGCAGCTGGTATAT........................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CATTTTCGCGGTTTCTGCCGTCATGTTTTATCAAAATCGCTACCGTCTTATGAATACTGT hal GATTTTAGGGG.................TCTGAAAATCGCTAATG-CTTATG........ ste .....................................................ATGCTAG -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub ACTCAGCCAGCCAGGAATCAGGCGGTCTTTTATCCATTTGTTTTTAAGAATTCCATTTAT hal ACGCAGCCCGCAAGGA................................AATACCGTTTGT ste AAACAGGCAGCCA.GAAACAGGCAGCCATCTGAGCAGCTGGTAT................ -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ]]]]]]]]]]]]]]]]] sub CCGCAATAAGTTTATACAGCAAGCTTTCTAAAATCCCGTGAAAAACGGGATTTTTTGCTT hal TCGTAACAACCTCAT........................GAATAGCGGTATCATTTGC.. ste ............................................................ -120 -110 -100 -90 -80 -70 sub TCAGTAGGCGTTTCGGAGCGCCAGCTGTTATAATGAAAAAAAACTATTGGAGCGGTAAAC hal ............................TATAAAGAAAA..................... ste .....................CAGCTGGTATA............................ -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...