Similar regions between promoters of yqgW
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAAGGCGTCAGCCCTTTTTCTTTTATGTATTGATTGATTTTATGTCCCTCGCCGCCCGGA hal .....................TTAATGGATCGAAAGATGTT................... ste ..............TTTAACTTTATTTTACTGTTTTTTTTCAAG.CCTTCCGCGCCGGGG -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<< <<<<<<<<<<<<<<<<<<<<< sub TCAAAAATCAGACATTGATCATCA-CTGATGAGAAAA--TATGCGTTCGCTTGAATCGGC hal ..................................................TTGTAGTGGA ste TCAACGATCAGGCATTGTCGGTCTGCAGACGACAACAAGTAAGCGTTGGCCTGAATCGGA -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<< sub CCTACTGGCATTCGTCTCCATTTCACTATTATCACCTCTTTCTTTTTTATGCTCTTATTA hal CCTAACGGTAGCTGAAACCAACTCA-TCGTATCGCCTC...................... ste CCGACAGGGATGCGCGTCCATTCCA-TACGATCTCCTCCTTTTCTT........TTATTT -180 -170 -160 -150 -140 -130 sub TGAGGGTTTTTGAAAAAAGATTCAAACAATCGCAATGAAAACCGCTATCGACAAACCTAT hal ......TTTTTCAAAAGAGA...........................TCGACAAATGAGA ste TACTGTTTTTTTTCAAGCGATGGAAGAGAA---AAGAGAAAGGGACCTCGACAAATGGGG -120 -110 -100 -90 -80 -70 sub AAAAAACAGGTAGAATAAAACTGGAAACAATTGCAGGTTTTTCAATGTAAAGGGGGCTGT hal AGAAAACGTTTAAAAT.....................TTTTTCAAAAGAGAGAGGGCT.. ste GAAAAAAGATTACAATGAAA........................................ -60 -50 -40 -30 -20 -10 sub GTT hal ... ste ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...