Similar regions between promoters of yqzF
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CAATCCCATACTGTTCTGCTTCTTTCAATCCCGGCGCCTCGGGGTCTTTGTCAACTACGG hal .......................................CTGGTGCTTTTTGATTTACGT ste .......................TGCAACCCCGGAGCGTGTTCATCTACATCCACGACTG -300 -290 -280 -270 -260 -250 <<<<<<< <<<<<<<<<<<<< <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CAATGAT-------ATCTATGATGGCT--GTTTTAATCAGAATATGTAATAACGCCGTTC hal CAACGATCCCTTGCACCTGAAATCGCTTCGCTGCTACAAGCATCTCAAGTAGAGCCGATC ste CCACGAC-------TTCAAACCCTGAT--GCCCCATGGAGCAGCTTCAACAACGATGTCC -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< < sub CCCTTTTGCCGGCACCTACTATCAGTACCTTTTGCA--TCCCGATACCCCTTTGTATGAA hal CTCCCTTTCCTGCTCCAAGAATGGCTACACGCTTCACGTTCTAACCTCCCCCTTGATCAA ste CACGCGAGTCAGCGCCAATAAGCATCACTTTTTTCA--TGTCCGTCCACC.......... -180 -170 -160 -150 -140 sub AAAATTTGCACACCTATTTATTCCGTTGCAATAATTTGCACA-ACCCTATGTTACCACGT hal AAAGTCCCCA-AGATAACTATTACGT.................................. ste ....TTTGCAGACATTTT................TTTGCAGACATTTTATCATACTTGAT -130 -120 -110 -100 -90 -80 sub TT--TCTTCTCTTGACAAAATATTTTTTCCGCTGGACAATAAAGGAAATGAAAAGATAAA hal .....CTTTTTTCGTTAAAATA...................................... ste TTGCTCTTTCCTTGACAAA.................CAATAACCGCTATGATA....... -70 -60 -50 -40 -30 -20 sub GGGGTTTTCTGAAG hal .............. ste .............. -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...