Similar regions between promoters of yraG
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CGACGCTTTTCTTAAAATCATTCACCAACAGTCTAATTTGTAACAGCTTCATATCGAGTG hal ......TTTTCACAAGATCA........................................ ste ...CGCTTTTCCC---ATCATTCCCCACC.............................TG -300 -290 -280 -270 -260 -250 sub CCTCCTATAAAACCATACTTTTACTGGTCATCCAATTTAATGATACCAAAGAAACCTGAC hal .............................ATAGAATTTAATG.................. ste CCTCCTTCATAAGC..................................AAACAGCCGGAC -240 -230 -220 -210 -200 -190 sub AGC-ACTATGTCAAGTTTCCATACTTCACCCTTATTTCAGATTTAAGTGCAGTTTAGTCC hal ..........................CATCATTGTATAAAATGAAATT--ATTTTAGTCT ste ACATACTATGTCACGTTCCCATCATTCCCC.............................. -180 -170 -160 -150 -140 -130 sub ATGTCATAAGAACGAGCAAAAACAGCGATTCTTAAAACAAAAAATGATACCGAGTGTATT hal GTGACTTA............................ACAAATAAGCAAGCCGAGAATA.. ste ..................AGAACAGCAACGCTTAGCACAATGAATGTT............ -120 -110 -100 -90 -80 -70 sub TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAA hal .........................GGAAAATAAAATTGGATCAACGACGGGTAC..... ste ............................................AAGGTGGTGAGAAGAA -60 -50 -40 -30 -20 -10 sub T hal . ste T -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...