Similar regions between promoters of ytoI
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTCATCCATTGATCTATACGGCCATAGGGGCGATATGGCTATCCGCAGTTTTATTTGTTT hal ..................................................TTATTTGTTT ste ............................................................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TATCTAAAATAGGGAATCGAAATATTGTTAAGACAGCGGTTGATGTCCATTTAAAAGAAA hal ................................................ATATAAAAGAAA ste ............................................GGCCCGTTATAATGAA -240 -230 -220 -210 -200 -190 >>>>> sub AATAAAGGTTTTTCCGCTTTACGATGTAAAAGGAATCACGTGGTCCTTGCGTTTGACTGG hal .......................ATATAAAAGAAATCA...................... ste AGTAA.........CGCTTTATGATG............CGTCGGCCGCGCGTTGAAACCG -180 -170 -160 -150 -140 -130 ]]]]]]]]]]]]]]]]] sub AACGAAATCAACG--CTGTAAGAAGCCGGTCGGGCTTCTTTTTTATTTTCCAGCCTCATT hal .........ACCC--CTCCATGAAACCGGCCTTGCTTATTTGTT................ ste GGGGAAAGCATCGAGCTGTAACA..................................... -120 -110 -100 -90 -80 -70 sub GCGTATAAATCCTTTGAAACCTTATAATAAAAACAAGAAGACTGTCCTTAGAGGTGAAAG hal ............................................................ ste ...................CGTTATAATGAAAGTAACAA..................... -60 -50 -40 -30 -20 -10 sub GC hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...