Similar regions between promoters of ytpI
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AGGGACGGTTCAGGCGTGCCGACCGCAAAAATATTTTTTTCAGGATATGTTTCACGCAGG hal AGCGATGGTTCTTCATCCCCGACAACAAACACGTTCTTTTCTGGATATCGCTCGCGAATA ste AGCGACGGATCGTCCGTTCCGACCGCGTACACCCTTTTTTTCGGAAACGACGCCCGAAGC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATTTCCGTAAGCCCACACTGTGATCCGTAGGCATCCGGATCAGGACGCACATGTCTATGT hal AGTGTCGCTAGCCCAACCTGTGAGCCAATGGCATCAGGATCTGGTCGTTCATGACGGTGG ste AACGCCGCCAACCCGCCTTGCGACCCGTACGCGTCCGGGTCCGGGCGAACATGGCGGTGG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAGATAATCGTGTCATATAATGATATGGTTCTGATCAATTCTGTTTTCATTTGATACTCC hal ATTATGATTTGATCATAGGCCGCAATGGCTTGTAAAATGTCGTGCTTCATCTTCTATCCC ste ATGATGATCGTGTCAAATT----CACGAATCGCATCAAGAATTTGTTGAT--GAACCGGT -180 -170 -160 -150 -140 -130 sub TTTATTGTTTTTATTCATTAAATCACATTCTCTGCCGACGGAAAAGAAA--AATAACGTC hal CTTCT......................................................C ste TTCATTCGTTCTTCCCCTTTAGTCACCT.............AAAAGAAATGAACAACGGA -120 -110 -100 -90 -80 -70 sub AAAACCAAGCCCGTTTTTGTATAAAATGGGGTTGTAAACTTTTACGATGGAGGATT-TCA hal GACAACAAACACGTTCTTTTCT...ATCAGGATCTGGTCGTTCATGACGGTGGATTATGA ste GGGACCCAACC................................................. -60 -50 -40 -30 -20 -10 sub TTT hal TTT ste ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...