Similar regions between promoters of yttB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCTTTGAGAAACGTTTTTCCTTTTTCAGTACATATCTGACAAGGTGATATAATCCATAGC hal ................TTCCTTTTTTAAT--ATAATTAGGGGGGCGAAATAATTCA.... ste .......GGAACGCTCCGCCTTTTTGATTGCATTTTT....................... -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CCAGTGCAATGAGACATGCCAGAAAACCTAAGAATGCTAATACCATTTCCATAATATGAC hal .............................................TTTCCATCCTATCAT ste ...........ATAAAAGCCAGAAAA.................................C -240 -230 -220 -210 -200 -190 sub CCCTTTTTCTATTTATT--TTAC-ATTTTTCAAACAATATTTGTTAGATTTTTTCACGCT hal AAATGTGTACTTTTAAAGCTTACGATATTTTACATAAAATTAGTT.GATATTTTACATAA ste GCCTTTTTGATTGCATT--TT....................................... -180 -170 -160 -150 -140 -130 sub CATCAGTTGAAAAATGTGAGAGAGACAGATAGAATGAATGTGCTATGATAACTGGATTCG hal AATTAGTTGCAAAACG............................................ ste .....................................................GCATTGG -120 -110 -100 -90 -80 -70 sub TACGGAGC-CGTTTTAGGTTTCGTTTTTTTCATGAGCTTTTTTAGGTAAGAAAGGGGGAT hal ....................TCGTTCTTCTAATGCGCTTTTTAATATAATTAGGGGGG.. ste AACGCTCCGCCTTTTTGATTGCATTTTTTCC............................. -60 -50 -40 -30 -20 -10 sub GAGT hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...