Similar regions between promoters of yuaF
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CGATTTTTTTCAAATGGTCAAGAACTTCCCGTATGCTCCATTCTTCAGCAGAAGGCTTTT hal ...............................TTTGCTCCATTTT................ ste ......TTCGCACAAGGCAAAATCCTGCCTGACCACAGCCTTTTTCA-CAGCAGTTTTTT -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GATTCAGCTTTTCGTCAGAAAGTCCTTTCAATTCGTTCCACGTTTCTAATCTGGCTTCAT hal .............................AATTTGCTCCATTTTCTTCTGTTTTCTTCGT ste GTTTAA................................................CTTCAA -240 -230 -220 -210 -200 -190 < <<<<<<<<<<<< sub T-AAAGATACTCATCATA-TCTCCTCCTAAAATGACATTACCATATATATAAGCAATTAT hal TCAAACCCATCCATCATCGTCACCTC.....ATGATATAAAACTATAAATGAG.AATTAT ste A-AAAGGTGCTCAACAAC-TCT................................AATTCT -180 -170 -160 -150 -140 -130 sub CATTTATAAAGCACTTCAAATGGGTTATTTGTCTTAAAATTTTGAAACTTTTCCCGAGGT hal GATATAAAA.............GGTTAATTTTATAGTAATTATATAATTAT......... ste CATTTAT............................AAAATGATGAAACCAACCGTTGCCT -120 -110 -100 -90 -80 -70 sub GTCTCGTATAAAT-GGTAACGGCAGCCGTTCATCAATGCATTGATGAAGAAAGGATGAGG hal ............................................................ ste CGCCCGTATCAATAGGTAAAGGC...........AACGAATTCTTCAAAAAAGG...... -60 -50 -40 -30 -20 -10 sub AAG hal ... ste ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...