Similar regions between promoters of yuzA
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<< sub TCCGGAAGTCTTTCCACTTCGCCGCGCCCGAAAATTAATTTGGTCGGATTCC-AGTATGT hal .............................GAAAATCAATTTG..CGGATTCATACTATGT ste ......AGCCGTTCGAGCTGCCCTTTTCCGAAAATCAGTTTCGTCGGGTTGC-GGAAAAT -300 -290 -280 -270 -260 -250 <<<<<<<<<<<< sub AAAGTTTTGCATGAC-ATCTCCTCCTTAGATTT--TTTATTATG-CAGAATGTCCTCACC hal ACAGCCTCCCTTTTC-TTTTTCCTCTTTCAGTA--TGAACGATG-GAAAAT-------CA ste AAACTCTTGCATATGGATGCCCTCCTTTTCCTGAATCTATTATGGCAGCGCCTGC-CACC -240 -230 -220 -210 -200 -190 sub ACATGTAAAGCAATCAGCTCTCACCGATCAGCATACCAGATGGTTTTATTTTGCAAGGTG hal ATTTGTAAATCAATCTGCT.......................................TC ste GGTTGTAAAGCCAACTGCTTT......TCATCATAC-AGTCCGTTTCGTTT......... -180 -170 -160 -150 -140 -130 sub CTGGGAAAGAAGCTGATATAAGCGAGGGCAGGCCAGCTTCCCTCATATGGAGAATGCATG hal CAGAGAACGGAGGTGATA....................................TTCATG ste ...........................................CATATGGA......... -120 -110 -100 -90 -80 -70 sub TATAGATTCTCCAATATGT-CACAATCTATAACTGTTTTAATAATTCATGGAGGAGGTTG hal TATAATTCAGCCGCTCTCTTCTCAATCTAAA............................. ste TATGGATGCCCTCCTTTTC-CTGAATCTATTA...........ATTCATCCTATAAGTTG -60 -50 -40 -30 -20 -10 sub CAAAAC hal ...... ste AAAA.. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...