Similar regions between promoters of yuzD
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<<<<<<<<<< sub ATCTACGTCTACAAGCTCACAGTCACCGCCGTCACGAAG-TAAAAACGGACGAAGTTTGT hal ................TCGCAGAAGCCACATTTAAGACGATCAAAACAGAGTTCGTTCGT ste .TCGACATCGACGAGTTCGCAGTCGCCGCCGTCGCGAAG-CAGGAACGGACGCAGTTTAT -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<< sub CCAGTACTTCCTGCACCTGTTCTTTCATTTCAACTTCAGTCATGACATTCG-CTCCTTTC hal .....AGTTAATGAACCTTTAAATAATTGTCCGATTTAGTGTTGACATTC.......... ste CTAAAACTTCTTGCACTTGTTCTTTGATTTCTTGATCCGTCATTTCCATCGACTCCTTTC -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GTCGTCATAAAACCATTATATTCAGTGTAACAATAAAAATCTATTGTTTGGTTTGCAAAG hal ..............ACTACGTTCACTGGTTCAATACTATTCGAATTCATGGATCATTAGA ste CTTAGTTTTTA----TTATAATCATGGTGACAAAAAAAATCTAATGATAAATTT...... -180 -170 -160 -150 -140 -130 <<<<<<<<<<<<<<<<<<<<<<< sub TTGCTTTCCCTATTATAGCACATTCAGACTTCAACACAAAAACGGTTTTTTTCTATAAAA hal TTACTT.CCCTATGATAACGCCGTC.................CGGTTTTTT.CTATGATA ste .........................................ACGCAGTTTATCTAAAACT -120 -110 -100 -90 -80 -70 sub AC--GCCCTTAGGCTCTGTATACTTAAAAGAAAGGACTTACATAGGAGAAGGGGGCGTCT hal AC--GCCGT...................AGAAAGGAACGCCCTATGATAACG........ ste TCTTGCACTTGTTCTTTGATTTCTTGA................................. -60 -50 -40 -30 -20 -10 sub ACAA hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...