Similar regions between promoters of yvgN

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AGCGGAAGCAAAGGACAAAGGGGCAATTGTCAAAGCGGCACCAAGAGCAAGTGTCATTGG hal ................................AAACGGAAGCGAGAAGAGGA-TCAATAG ste .....AAAGAAAGAACAAGAGGGACGCGGGGAAGTGAGAAAGGAGAGCAAG......... -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<< sub GATACGAATACGTTTCAAGTTGTTTCCTCCTTTGTTTTCATTTGGTTACACTACAGGCAT hal CTTACCAAACGATTTCAATTTGTTTTCT---TTTCTTCCATTTTGTTAGA.......... ste .........ACGTTTCCCCTCGTTTTTGCCTTGATTTTC..................... -240 -230 -220 -210 -200 -190 sub ACCCTGCTCAATGTATTTGTAATCTCAATATTGTTAAAATAGGAAAAAAATAGTGTTTGG hal ...........TGTTTTCTTTTCTTCCATTTTGTTAGAAAATGAAGACGAT......... ste ............................................................ -180 -170 -160 -150 -140 -130 sub ATTTGCCTGTGCTGTGAAAAAAGAAGCAAAAAGAGGGTCTTAAGCGTATTATTGG-TATC hal ...............GCAAACGGAAGCGAGAAGAGGATCAATAGCTTACCAAACGATTTC ste ...................AAAGAAAGAACAAGAGGGAC..................... -120 -110 -100 -90 -80 -70 sub GGCTGAGAGGAATGTGAGATAATATAG-ACGCTTACATTTCAGTGAAAGGGTGGAGGTTC hal GGTTCCGCTAAGTGTGAGCAAATTT................................... ste ........GGGAAGTGAGAAAGGAGAGCAAGCATATATTT.................... -60 -50 -40 -30 -20 -10 sub AA hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...