Similar regions between promoters of ywpB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CAATTTTCTCTTTCAGTGTGCAAACGTGATTCATTTTGCGTTTGCTCATTGCGGAATACC hal .............................TCCCTTTTTCGTTTGCCCGT........... ste ....................CAAACGAGA........................GTATTCC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ACTCGTCTAACATGTTTAGCATTCTTTTTTCAATAAACTTCGAAATCATTTTCCTACCTC hal ...............................AATAAACTCC................... ste GCCCGTCCA..........................ATCATCGATATCGT........... -240 -230 -220 -210 -200 -190 sub TTTGCTATTGGTAAAATCTATAATTATCATATCATAACTTTTGACGGCTCTCATTGACAG hal ..TGGTCGTGGTATAAT....................................TCGAAAG ste ............................................................ -180 -170 -160 -150 -140 -130 sub TTGGTTACATTTTAGCGCGGTTGAAAAAGAGATTAATTCATAATATACTTTTCAAATGTA hal GTGGTT...............................TCGTGGTATAATAACGAAATAAA ste .............ACCGCGGCTGATGAAG............................... -120 -110 -100 -90 -80 -70 sub CAGATTGGATCTTTGATGATTGCTATACATACTAATGCAGATGAAGGAGATGTCAAGACA hal TCGATTCGA................................................... ste ....................................GCTGATGAAG.............. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...