Transcription factor: |
AbrB |
| Factor type | AbrB-SpoVT |
|---|---|
| SWISS-PROT | P08874 |
| SubtiList | BG10100 |
| Consensus seq. | WAWWTTTWCAAAAAAW, TGGNA |
| Comment | Bi-functional expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation acts as the Spo0A-AbrB circuit also involved in catabolite repression reviewed in Klier, A., et al., 1992 (93073719). |
| Promoter | Sigma | Regulation | Location | Binding seq.(cis-element) | Exp. | Author | Year |
|---|---|---|---|---|---|---|---|
| spo0E | SigA | Negative | -39:-5 | TATGTTTACAAATAAAGTATAATCTGTAATAATGC | GS FT | Strauch MA, et al. | 1989 |
| abrB | ND | Negative | -43:-14 | CAAAATGATTGACGATTATTGGAAACCTTG | GS FT | Strauch MA, et al. | 1989 |
| aprE | ND | Negative | -59:+15 | AAAATCATCTCAAAAAAATGGGTCTACTAAAATATTATTCCATCTATTAC AATAAATTCACAGAATAGTCTTT |
GS FT | Strauch MA, et al. | 1989 |
| dppA | SigA | Negative | -16:+18 | TTTAATATAATTTGTTAGAATATTCATAATTTAG | FT DB | Slack FJ, et al. | 1991 |
| spoVG | SigH | Negative | -75:-6 | TAACTATATCCTATTTTTTCAAAAAATATTTTAAAAACGAGCAGGATTTC AGAAAAAATCGTGGAATTGA |
GS FT | Furbass R, et al. | 1991 |
| tycA | ND | Negative | -60:-35 | TTTTTTGCAAAATATCCCTATTTTTTAAT | GS FT | Furbass R, et al. | 1991 |
| tycA | ND | Negative | +169:+199 | GAAGGGAATTTCCCAGAAACAGGAAATTTTCT | GS FT | Furbass R, et al. | 1991 |
| tycA | ND | Negative | +207:+231 | TTAAAATACCCAAATGATGGAAAAT | GS FT | Furbass R, et al. | 1991 |
| sinI | ND | Negative | No data | ATTTAATGGCAAATGACTTCCAGAGA | GS FT | Strauch MA, et al. | 1995 |
| hutP | ND | Positive(dereperession) | +199:+221 | GAATTGAAACCGCTTCCAAAAAG | FT | Fisher SH, et al. | 1994 |
| rbsR | ND | Positive | -133:-67 | GAAATCTTCATCCATATTTGTGAAGACTTTGTCAAAAAAAGAGTGAAAAC CTTAAATTTTTCAATTATATATACAAT |
DB | Strauch MA, et al. | 1995 |
| rbsR | ND | Positive | -4:+29 | CTATGTAAACGGTTACATAAACAAGGAGGAGCT | DB | Strauch MA, et al. | 1995 |
| hpr | ND | Positive | ND | ND | GS | Strauch MA, et al. | 1989 |
| kinB | ND | Negative | (-10 upstream) | AAAATGAAGATTATAAATCACAATATTAT | FT | Strauch MA | 1995 |
| pbpE | SigA | Negative | (-35 upstream) | ATGTGATGGGTTAAAAAGGATCTCT | FT | Strauch MA | 1995 |
| pbpE | SigA | Negative | (-35 upstream) | GGATTTTTCAAAATATTTGAAACGTT | FT | Strauch MA | 1995 |
| spo0H | SigA | Negative | -35:+5 | TGACGCTTTTTTGCCCAATACTGTATAATATTTCTATCTA | FT | Strauch MA | 1995 |
| ftsA | ND | Negative | (+1 Downstream) | AATAAACATAAAATGTGAA | FT | Strauch MA | 1995 |
| ftsA | ND | Negative | (+1 Downstream) | TTCTGTTGTTATTTTTTGTTACAC | FT | Strauch MA | 1995 |
| sboA | ND | Negative | Unknown | Unknown | abrB mutation | Zheng G et al. | 2000 |
| bsuB1 | ND | Unknown | (-10 upstream) | GAAAAGTACCAGCAGGGTTTATTGTGTT--AATCATTACAAAAAATGATAAAA | FT | Strauch MA | 1995 |