Transcription factor: |
DegU |
| Factor type | LuxR/UhpA FAMILY |
|---|---|
| SWISS-PROT | P13800 |
| SubtiList | BG10393 |
| Consensus seq. | AGAA -----N11----- TTCAG |
| Comment | pleiotropic regulator involved in various post-exponential phase responses makes a two component system with DegS kinase |
| Promoter | Sigma | Regulation | Location | Binding seq.(cis-element) | Exp. | Author | Year |
|---|---|---|---|---|---|---|---|
| comK | sigA | Positive | Unknown | Unknown | DB | Ogura M, et al. | 1996 |
| aprE | ND | Positive | -188:-162 | ACCTAAAAAAGCATGACAT--TTCAGCAT | Other | Dartois V, et al. | 1998 |
| degQ | ND | Positive? | -173:-147 | ATAAAGAATCTTTCTCAAT--TTCAGCAC | Other | Dartois V, et al. | 1998 |
| wapA | ND | Negative | -42:-16 | AAAAATATTGTAATGATAT--TTCAGTCT | DP SDM | Dartois V, et al. | 1998 |
| sacB | ND | Positive | -128:-100 | GAAAAGAAACAGATAGATTTTTTTAGTTC | Other | Dartois V, et al. | 1998 |
| sacB | ND | Positive | -118:-92 | AGATAGATTTTTTTAGTTC--TTTAGGCC | Other | Dartois V, et al. | 1998 |
| sacX | ND | Positive? | +245:+271 | ATGAACAAGCCGACTTTTC--TTCAGCAA | Other | Dartois V, et al. | 1998 |
| degU | ND | Positive? | (214:239;translational start site) | GAGAAGAAAAACAAATCA---TTCGGCTT | Other | Dartois V, et al. | 1998 |
| degR | sigD | Positive? | -286:-261 | ATCGAGAGCTGCCAGCTC---TTCAGATT | Other | Dartois V, et al. | 1998 |
| srfAA | sigB | Positive? | (168:184;translation start site) | TGAAAAAACAGTACAAAGA--TTCAGCCC | Other | Dartois V, et al. | 1998 |
| yxjJ | ND | Negative | (347:373;translation start site) | AAAAAGAAATCCAGCCCAT--TTCAAAAA | Other | Dartois V, et al. | 1998 |
| comG | ND | Positive | -94:-68 | TGCCAGAAAGAATTGGTTT--TTCAGCAT | Other | Dartois V, et al. | 1998 |
| comC | ND | Positive | -100:-74 | CGGCAGAATCAAAAAAAGA--TTCTGCCG | Other | Dartois V, et al. | 1998 |
| comE | ND | Positive | (284:310:translation start site) | AAATAAAAATCATCTCGTT--TTCAGAAA | Other | Dartois V, et al. | 1998 |
| mecA | ND | Negative | -85:-59 | AAATAGAAATACAAAGGAA--TTCACACT | Other | Dartois V, et al. | 1998 |
| comF-P1 | sigA | Positive? | No data | data not shown | DB | Londono-Vallejo JA, et al. | 1993 |