List of Transcription Factors
The classification of factors below is based on the existence of
the Pfam motifs
(Sanger Center, UK).
Since these motifs do not always correspond to DNA-binding domains,
a factor can belong to multiple families.
Sigma factors
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Sigma70 |
SigA |
RpoD CrsA |
  |
RNA polymerase major sigma-43 factor (sigma-A) |
136 |
SigB |
RpoF |
  |
RNA polymerase sigma-37 factor (sigma-B) |
16 |
SigD |
FlaB |
  |
RNA polymerase sigma-28 factor (sigma-D) |
16 |
SigE |
SpoIIGB |
  |
RNA polymerase sporulation-specific sigma-29 factor (sigma-E) |
34 |
SigF |
SpoIIAC |
  |
RNA polymerase sporulation-specific sigma factor (sigma-F) |
10 |
SigG |
SpoIIIG |
  |
RNA polymerase sporulation-specific sigma factor (sigma-G) |
19 |
SigK |
  |
  |
RNA polymerase sporulation-specific sigma factor (sigma-K) |
24 |
SigH |
Spo0H |
  |
RNA polymerase sigma-30 factor (sigma-H) |
14 |
YkoZ |
  |
  |
similar to RNA polymerase sigma factor |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Sigma54_factors |
SigL |
  |
  |
RNA polymerase sigma-54 factor (sigma-L) |
4 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Sigma70_ECF |
SigV |
  |
  |
RNA polymerase ECF-type sigma factor (sigma-V) |
  |
SigW |
YbbL |
  |
RNA polymerase ECF-type sigma factor (sigma-W) |
21 |
SigX |
YpuM |
  |
RNA polymerase ECF-type sigma factor (sigma-X) |
8 |
SigY |
YxlB |
  |
RNA polymerase ECF-type sigma factor (sigma-Y) |
  |
SigZ |
  |
  |
RNA polymerase ECF-type sigma factor (sigma-Z) |
  |
YlaC |
  |
  |
similar to RNA polymerase ECF-type sigma factor |
  |
YhdM |
SigM |
  |
similar to RNA polymerase ECF-type sigma factor |
1 |
Xpf |
Pcf YkxE |
  |
RNA polymerase PBSX sigma factor-like |
  |
Helix turn helix family
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
MarR |
YkvE |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YpoP |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YkoM |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YhbI |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YxaD |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YdgG |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YdgJ |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YfiV |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YusO |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YwoH |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YetL |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YybA |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YwhA |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YwaE |
Ipa-10R |
  |
similar to transcriptional regulator (MarR family) |
  |
YsmB |
  |
  |
similar to transcriptional regulator (MarR family) |
  |
YkmA |
  |
  |
similar to hypothetical proteins |
  |
YcgE |
  |
  |
ycgE |
  |
Hpr |
CatA ScoC |
  |
transcriptional regulator |
10 |
YdcH |
  |
  |
similar to hypothetical proteins from B. subtilis |
  |
YbfA |
  |
  |
ybfA |
  |
YvnA |
  |
  |
similar to hypothetical proteins from B. subtilis |
  |
YhjH |
  |
  |
similar to hypothetical proteins |
  |
YvmB |
YzhA |
  |
similar to hypothetical proteins |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
LacI |
CcpA |
GraR AlsA |
  |
transcriptional regulator (Lacl family) |
34 |
MsmR |
  |
  |
transcriptional regulator (LacI family) |
  |
YhjM |
  |
  |
similar to transcriptional regulator (LacI family) |
  |
RbsR |
  |
  |
transcriptional regulator (LacI family) |
  |
YkvZ |
  |
  |
similar to transcriptional regulator (LacI family) |
  |
DegA |
  |
  |
transcriptional regulator (LacI family) |
  |
YvdE |
  |
  |
similar to transcriptional regulator (LacI family) |
  |
YyaG |
CcpB |
  |
similar to transcriptional regulator (LacI family) |
2 |
KdgR |
  |
  |
transcriptional regulator (LacI family) |
2 |
YjmH |
ExuR |
  |
similar to transcriptional regulator (LacI family) |
1 |
LacR |
YvfJ |
  |
transcriptional regulator (LacI family) |
1 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
GntR |
AraR |
AraC YvbS |
  |
transcriptional regulator (LacI family) |
8 |
YbgA |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YydK |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YvoA |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YhcF |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YurK |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YmfC |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YdeF |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YdeL |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YcnF |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YisV |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YdfD |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YcxD |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
YhdI |
  |
  |
similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like) |
  |
TreR |
YfxA |
  |
transcriptional regulator (GntR family) |
2 |
YdhC |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YtrA |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
GntR |
  |
  |
transcriptional regulator (GntR family) |
1 |
YcbG |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YdhQ |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
YvfI |
  |
  |
similar to transcriptional regulator (GntR family) |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
LysR (HTH_1) |
YrdQ |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YwbI |
Ipa-24D |
  |
similar to transcriptional regulator (LysR family) |
  |
YybE |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YwqM |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
GltR |
YrdL |
  |
transcriptional regulator (LysR family) |
4 |
YkuM |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YusT |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YofA |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
AlsR |
  |
  |
transcriptional regulator (LysR family) |
1 |
YvbU |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YwfK |
Ipa-89D |
  |
similar to transcriptional regulator (LysR family) |
  |
CitR |
  |
  |
transcriptional regulator (LysR family) |
1 |
YtlI |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YcgK |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YclA |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YoaU |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YraN |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
GltC |
  |
  |
transcriptional regulator (LysR family) |
3 |
YxjO |
  |
  |
similar to transcriptional regulator (LysR family) |
  |
YusF |
  |
  |
yusF |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
ArsR (HTH_5) |
YozA |
  |
  |
similar to transcriptional regulator (ArsR family) |
  |
YqcJ |
ArsR |
  |
similar to transcriptional regulator (ArsR family) |
1 |
YvbA |
  |
  |
similar to transcriptional regulator (ArsR family) |
  |
YdeT |
  |
  |
similar to transcriptional regulator (ArsR family) |
  |
YceK |
  |
  |
similar to transcriptional regulator (ArsR family) |
  |
YczG |
  |
  |
similar to transcriptional regulator (ArsR family) |
  |
YdfF |
  |
  |
ydfF |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
DeoR |
IolR |
  |
  |
transcriptional regulator (DeoR family) |
4 |
YulB |
  |
  |
similar to transcriptional regulator (DeoR family) |
  |
FruR |
  |
  |
transcriptional regulator (DeoR family) |
1 |
GlcR |
YwpI |
  |
transcriptional regulator (DeoR family) |
  |
YtzE |
  |
  |
similar to transcriptional regulator (DeoR family) |
  |
YcnK |
  |
  |
similar to transcriptional regulator (DeoR family) |
  |
SpoIIID |
  |
  |
transcriptional regulator |
14 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
AraC (HTH_2) |
YisR |
YuxC YucF |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YtdP |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YdeC |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YbfI |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YobQ |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YesS |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YfiF |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YbbB |
YzbC |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
AdaA |
  |
  |
methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) |
2 |
YdeE |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YbfP |
  |
  |
similar to transcriptional regulator (AraC/XylS family) |
  |
YesN |
  |
response_reg |
similar to two-component response regulator [YesM] |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
GerE |
ComA |
SrfB ComAA |
response_reg |
two-component response regulator |
7 |
YocG |
  |
response_reg |
similar to two-component response regulator [YocF] |
  |
YvqC |
  |
response_reg |
similar to two-component response regulator [YvqE] |
  |
YfiK |
  |
response_reg |
similar to two-component response regulator [YfiJ] |
  |
YhcZ |
  |
response_reg |
similar to two-component response regulator [YhcY] |
  |
DegU |
SacU Iep |
response_reg |
two-component response regulator |
16 |
YdfI |
  |
response_reg |
similar to two-component response regulator [YdfH] |
  |
YvfU |
  |
response_reg |
similar to two-component response regulator [YvfT] |
  |
YxjL |
  |
response_reg |
similar to two-component response regulator [YxjM] |
  |
GerE |
  |
  |
transcriptional regulator |
23 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Crp |
YdbG |
  |
response_reg |
similar to two-component response regulator [YdbF] |
1 |
Fnr |
  |
  |
transcriptional regulator (FNR/CRP family) |
2 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Xre (HTH_3) |
YqaE |
  |
  |
similar to transcriptional regulator (phage-related) (Xre family) |
  |
YonR |
  |
  |
similar to transcriptional regulator (phage-related) (Xre family) |
  |
YdcN |
  |
  |
similar to transcriptional regulator (phage-related) (Xre family) |
  |
YobD |
  |
  |
similar to transcriptional regulator (phage-related) (Xre family) |
  |
AnsR |
  |
  |
transcriptional regulator (Xre family) |
1 |
Xre |
  |
  |
transcriptional regulator |
4 |
Slr |
YveJ |
  |
transcriptional regulator |
  |
SinR |
Sin FlaD |
  |
transcriptional regulator |
6 |
YvaN |
  |
  |
similar to hypothetical proteins |
  |
YvaO |
  |
  |
similar to hypothetical proteins |
  |
YopS |
  |
  |
similar to hypothetical proteins from B. subtilis |
  |
YotL |
  |
  |
similar to hypothetical proteins from B. subtilis |
  |
YqaF |
  |
  |
yqaF |
  |
YozG |
  |
  |
similar to transcriptional regulator |
  |
YazB |
  |
  |
yazB |
  |
YvzC |
  |
  |
yvzC |
  |
YopO |
  |
  |
yopO |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
MerR |
GlnR |
  |
  |
transcriptional regulator |
6 |
YraB |
  |
  |
similar to transcriptional regulator (MerR family) |
  |
TnrA |
ScgR |
  |
transcriptional regulator |
11 |
YyaN |
  |
  |
similar to transcriptional regulator (MerR family) |
  |
YfmP |
  |
  |
similar to transcriptional regulator (MerR family) |
  |
BmrR |
  |
  |
transcriptional regulator |
1 |
BltR |
Bmr2R BmtR |
  |
transcriptional regulator |
1 |
Mta |
YwnD |
  |
transcriptional regulator |
4 |
YdfL |
  |
  |
similar to multidrug-efflux transporter regulator |
  |
YhdQ |
  |
  |
similar to transcriptional regulator (MerR family) |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
TetR |
YdeS |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YhgD |
YixD |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YsiA |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YrhI |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YvdT |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YuxN |
  |
  |
similar to hypothetical proteins from B. subtilis |
  |
YerO |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YcnC |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YxaF |
  |
  |
similar to hypothetical proteins |
  |
LmrA |
Lin-2 YccB |
  |
transcriptional regulator |
1 |
PksA |
  |
  |
transcriptional regulator |
  |
YvkB |
  |
  |
similar to transcriptional regulator (TetR/AcrR family) |
  |
YvaF |
  |
  |
yvaF |
  |
YttP |
  |
  |
yttP |
  |
YobS |
  |
  |
yobS |
  |
YwcC |
Ipa-33D |
  |
alternate gene name: ipa-33d |
  |
YxbF |
YxaT |
  |
alternate gene name: yxaT |
  |
YfiR |
  |
  |
similar to hypothetical proteins |
  |
YdgC |
  |
  |
similar to hypothetical proteins |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
AsnC_trans_reg |
AzlB |
YrdG |
  |
transcriptional regulator (Lrp/AsnC family) |
1 |
YwrC |
  |
  |
similar to transcriptional regulator (Lrp/AsnC family) |
  |
LrpA |
YddO |
  |
transcriptional regulator (Lrp/AsnC family) |
1 |
LrpB |
YddP |
  |
transcriptional regulator (Lrp/AsnC family) |
1 |
LrpC |
YdaI |
  |
transcriptional regulator (Lrp/AsnC family) |
1 |
YezC |
  |
  |
similar to transcriptional regulator (Lrp/AsnC family) |
  |
YugG |
  |
  |
similar to transcriptional regulator (Lrp/AsnC family) |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
LexA_DNA_bind |
LexA |
DinR |
  |
transcriptional regulator |
8 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
HTH_6 |
YbbH |
  |
  |
similar to hypothetical proteins |
  |
YfiA |
  |
  |
similar to hypothetical proteins |
  |
Other family
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
trans_reg_C |
YycF |
  |
response_reg |
similar to two-component response regulator [YycG] |
  |
YbdJ |
  |
response_reg |
similar to two-component response regulator [YbdK] |
  |
YcbL |
  |
response_reg |
similar to two-component response regulator [YcbM] |
  |
YvcP |
  |
response_reg |
similar to two-component response regulator [YvcQ] |
  |
YxdJ |
  |
response_reg |
similar to two-component response regulator [YxdK] |
  |
ResD |
YpxD |
response_reg |
two-component response regulator |
9 |
YrkP |
  |
response_reg |
similar to two-component response regulator [YrkQ] |
  |
PhoP |
  |
response_reg |
two-component response regulator |
15 |
YtsA |
  |
response_reg |
similar to two-component response regulator [YtsB] |
  |
YkoG |
  |
response_reg |
similar to two-component response regulator [YkoH] |
  |
YvqA |
  |
response_reg |
similar to two-component response regulator [YvqB] |
  |
YclJ |
  |
response_reg |
similar to two-component response regulator [YclK] |
  |
YvrH |
  |
response_reg |
similar to two-component response regulator [YvrG] |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
response_reg |
YesN |
  |
AraC (HTH_2) |
similar to two-component response regulator [YesM] |
  |
ComA |
SrfB ComAA |
GerE |
two-component response regulator |
7 |
YocG |
  |
GerE |
similar to two-component response regulator [YocF] |
  |
YvqC |
  |
GerE |
similar to two-component response regulator [YvqE] |
  |
YfiK |
  |
GerE |
similar to two-component response regulator [YfiJ] |
  |
YhcZ |
  |
GerE |
similar to two-component response regulator [YhcY] |
  |
DegU |
SacU Iep |
GerE |
two-component response regulator |
16 |
YdfI |
  |
GerE |
similar to two-component response regulator [YdfH] |
  |
YvfU |
  |
GerE |
similar to two-component response regulator [YvfT] |
  |
YxjL |
  |
GerE |
similar to two-component response regulator [YxjM] |
  |
YdbG |
  |
Crp |
similar to two-component response regulator [YdbF] |
1 |
YycF |
  |
trans_reg_C |
similar to two-component response regulator [YycG] |
  |
YbdJ |
  |
trans_reg_C |
similar to two-component response regulator [YbdK] |
  |
YcbL |
  |
trans_reg_C |
similar to two-component response regulator [YcbM] |
  |
YvcP |
  |
trans_reg_C |
similar to two-component response regulator [YvcQ] |
  |
YxdJ |
  |
trans_reg_C |
similar to two-component response regulator [YxdK] |
  |
ResD |
YpxD |
trans_reg_C |
two-component response regulator |
9 |
YrkP |
  |
trans_reg_C |
similar to two-component response regulator [YrkQ] |
  |
PhoP |
  |
trans_reg_C |
two-component response regulator |
15 |
YtsA |
  |
trans_reg_C |
similar to two-component response regulator [YtsB] |
  |
YkoG |
  |
trans_reg_C |
similar to two-component response regulator [YkoH] |
  |
YvqA |
  |
trans_reg_C |
similar to two-component response regulator [YvqB] |
  |
YclJ |
  |
trans_reg_C |
similar to two-component response regulator [YclK] |
  |
YvrH |
  |
trans_reg_C |
similar to two-component response regulator [YvrG] |
  |
LytT |
  |
  |
two-component response regulator |
  |
CitT |
YflQ |
  |
two-component response regulator |
  |
YufM |
  |
  |
similar to two-component response regulator [YufL] |
  |
YccH |
  |
  |
similar to two-component response regulator [YccG] |
  |
Spo0A |
Spo0C Spo0G SpoIIL Sof-1 |
  |
two-component response regulator |
23 |
YcbB |
YzgB |
  |
similar to two-component response regulator [YcbA] |
  |
CheB |
CheL |
  |
methyl-accepting chemotaxis proteins (MCP)-glutamate methylesterase and two-component response regulator-like |
  |
YneI |
YoxH |
  |
similar to two-component response regulator (CheY homolog) |
  |
CheY |
CheB |
  |
two-component response regulator |
  |
Spo0F |
  |
  |
two-component response regulator |
  |
CheV |
  |
  |
modulation of CheA activity in response to attractants (chemotaxis) |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Fur |
YqfV |
Zur |
  |
similar to transcriptional regulator (Fur family) |
2 |
YqkL |
Fur |
  |
similar to transcriptional regulator (Fur family) |
3 |
YgaG |
  |
  |
similar to transcriptional regulator (Fur family) |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Sigma54-related factors |
YqiR |
BkdR |
  |
similar to transcriptional regulator (sigma-L-dependent) |
1 |
YplP |
  |
  |
similar to transcriptional regulator (sigma-L-dependent) |
  |
AcoR |
YfjG YzcB |
  |
transcriptional regulator |
2 |
RocR |
  |
  |
transcriptional regulator (NtrC/NifA family) |
5 |
GlcT |
YkwA |
Bgl_antitermin |
transcriptional antiterminator (BglG family) |
1 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Bgl_antitermin |
GlcT |
YkwA |
Sigma54-related factors |
transcriptional antiterminator (BglG family) |
1 |
LicR |
CelR |
  |
transcriptional regulator (antiterminator) |
1 |
YjdC |
  |
  |
similar to transcriptional antiterminator (BglG family) |
  |
LicT |
  |
  |
transcriptional antiterminator (BglG family) |
2 |
SacT |
Ipa-47D |
  |
transcriptional antiterminator |
1 |
SacY |
Ipa-13R SacS |
  |
transcriptional antiterminator |
1 |
YdaA |
  |
  |
similar to transcriptional antiterminator (BglG family) |
  |
LevR |
  |
  |
transcriptional regulator (NifA/NtrC family) |
3 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
CSD |
CspB |
  |
  |
major cold-shock protein |
  |
CspC |
  |
  |
cold-shock protein |
  |
CspD |
  |
  |
cold-shock protein |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
IclR |
YcsO |
KipR |
  |
similar to transcriptional regulator (IclR family) |
1 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
GreA_GreB |
GreA |
  |
  |
transcription elongation factor |
  |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Fe_dep_repress |
YqhN |
  |
  |
similar to transcriptional regulator |
2 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
HrcA |
HrcA |
YqxE YqeS |
  |
transcriptional regulator |
2 |
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
Arg_repressor |
AhrC |
  |
  |
transcriptional regulator |
5 |
No family assigned
Family |
ORF |
Synonym |
Other family |
Description |
#Binding sites |
  |
PyrR |
  |
  |
transcriptional attenuator and uracil phosphoribosyltransferase activity (minor) |
  |
PurR |
YabI |
  |
transcriptional regulator |
4 |
RibC |
  |
  |
riboflavin kinase |
1 |
XylR |
  |
  |
transcriptional regulator |
1 |
YacF |
  |
  |
similar to transcriptional regulator (nitrogen regulation protein) |
  |
PaiA |
  |
  |
transcriptional regulator |
1 |
ComQ |
  |
  |
transcriptional regulator |
1 |
YppQ |
  |
  |
similar to transcriptional regulator (PilB family) |
  |
BirA |
  |
  |
transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase |
1 |
NrgB |
  |
  |
nitrogen-regulated PII-like protein |
  |
SacX |
Ipa-14R SacS |
  |
negative regulatory protein of SacY |
  |
CodY |
  |
  |
transcriptional regulator |
8 |
DeoR |
YxxC |
  |
transcriptional regulator |
2 |
TenI |
  |
  |
transcriptional regulator |
1 |
GutR |
  |
  |
transcriptional regulator |
1 |
SpoVT |
YabL |
  |
transcriptional regulator |
16 |
Abh |
YlxT YzaA |
  |
transcriptional regulator |
  |
AbrB |
CpsX |
  |
transcriptional regulator |
21 |
LytR |
  |
  |
membrane-bound protein |
2 |
YvhJ |
  |
  |
similar to transcriptional regulator |
  |
YwtF |
  |
  |
- |
  |
ComK |
  |
  |
competence transcription factor (CTF) |
11 |
CtsR |
YacG |
  |
transcriptional regulator |
10 |
GlpP |
  |
  |
transcription antiterminator |
4 |
HutP |
HutP1 |
  |
transcriptional regulator |
1 |
MtrB |
  |
  |
tryptophan operon RNA-binding attenuation protein (TRAP) |
1 |
PaiB |
YumE |
  |
transcriptional regulator |
1 |
YpuN |
RsiX |
  |
similar to negative regulator of sigma-X activity |
  |
SacV |
YdzC |
  |
transcriptional regulator |
  |
SenS |
  |
  |
transcriptional regulator |
2 |
SplA |
YkxI |
  |
transcriptional regulator |
  |
TenA |
  |
  |
transcriptional regulator |
4 |
YjdI |
  |
  |
similar to transcription regulation |
  |
YrhM |
  |
  |
similar to anti-sigma factor |
  |
FlgM |
  |
  |
anti-sigma factor repressor of sigma-D-dependent transcription |
  |
Med |
YjaW |
  |
positive regulator of comK |
1 |
RsbX |
  |
  |
serine phosphatase (dephosphorylation of RsbS) |
  |
Spo0E |
  |
  |
negative sporulation regulatory phosphatase |
  |