We scaned DinR binding sites at upstream reagion of the ortholog genes by PSSM.
| Transcription Factor | Regulatec gene | organism | position | cis-element | socre |
|---|
| DinR | dinB | Bsu | -44..-55 | GAACTCATGTTC | 15.1 |
|---|
| DinR | dinB | Dra | -4..-15 | GAATTTATGTTC | 12.6 |
|---|
| DinR | recA | Bsu | -75..-86 | GAACGCATATTC | 14.7 |
|---|
| DinR | recA | Bha | -109..-120 | GAACATTTATTC | 12.3 |
|---|
| DinR | recA | Cac | -36..-47 | GAACATTTGTTC | 14.8 |
|---|
| DinR | recA | Mtu | -111..-122 | GAACACCTGTTC | 12.1 |
|---|
| DinR | recA | Mle | -101..-112 | GAACATCTGTTC | 12.1 |
|---|
| DinR | uvrB | Bsu | -81..-92 | GAACTTTAGTTC | 12.9 |
|---|
| DinR | uvrB | Bha | -79..-90 | GAACGTTTGTTT | 14.9 |
|---|
| DinR | uvrB | Cac | -17..-28 | AAACATTTGTTC | 12.3 |
|---|
| DinR | uvrB | Hin | -237..-248 | GATCCCTTGTTC | 11.7 |
|---|
| DinR | yneA | Bsu | -14..-25 | GAATGTTTGTTC | 14.9 |
|---|
| DinR | yneA | Lin | -81..-92 | GAACCTTTGTTT | 12.7 |
|---|
position : counted from translation start site.