SigF

We scaned SigF binding sites at upstream reagion of the ortholog genes by PSSM.

Transcription FactorRegulatec geneorganismpositioncis-elementsocre
SigFdacFBsu-32..-60GTATAAAACCATCACGCTTGGAAAAAATA15.6
SigFdacFBha-91..-119GTATAAAAAGTTCATGATAGGAAAAAATG14.3
SigFdacFCac-67..-95GTTTAAAAAAAACTGTTATGTCAAAAATA13.4
SigFdacFLin-25..-54GTATAGAGTAAAAGAGTTGAGTTAAATCCA9.7
SigFdacFMtu-11..-39GTTTAACTTCCAGGGCTCCGGTAGGCCTA9.9
SigFdacFMtC-11..-39GTTTAACTTCCAGGGCTCCGGTAGGCCTA9.9
SigFdacFEcZ-18..-46MAATAGCTGTTCTTTTTACGGAAATACTT9.2
SigFdacFCpn-81..-110GTATATTTCCTCTGATTTATGGTAATTCTT11.4
SigFkatXBsu-30..-59TTTTAAAATCTTTCCATTCAGGGAATATTG9.7
SigFkatXBha-76..-104GTATAGAACCTTAAGTCAGCGACAAACTA11.2
SigFkatXCgl-32..-61TCATACATTGTCCTCGTAGGGGCAAGTATA10.2
SigFlonBBsu-54..-83GTTTATTCCCGTCTTCTATGGGAGATACTA12.7
SigFlonBBha-35..-63GATTAGGTCATTTGTTCCCGGAGATACTA10.6
SigFlonBCac-60..-88GTATATTAAAATTCAAATATCACATAATA10.1
SigFsigGBsu-35..-63GTTAAGTATCTCCTTGGGTGGGAAAAATA11.6
SigFsigGCac-34..-63GTATAAAATAGCTCCCCTGAGGGAATAATT13.7
SigFsigGSty-158..-187GTATATACTTAACTTTACGCGCGCAAGACA10.3
SigFsigGNos-253..-281GTTTATGTATGTATTTCCCAGCAGAAATA9.4
SigFspoIIQBsu-65..-94GTTTAGTCAAGAACAAAGCAGGCAAAAACA13.1
SigFspoIIQBha-20..-49GTATAGTTTTAGCGCAACCTGATCAGAATG10.2
SigFspoIIQSau-11..-39GTATATTGAGAAATAAACAGGTAAAAAGG10.9
SigFspoIIQjHp-87..-115GCATGACTTTATTGGGGTGGGTAAAAATT12.7
SigFspoIIQNos-124..-152GTATAACAATATCTTTTTTGACAGTAATT9.4
SigFspoIIQAae-57..-85TTATAGGACACTTCATAAAGGACATACTC9.6
SigFspoIVBBsu-64..-93TTATAAATAAGCCGTCAGAAGGCAAAATTA12.1
SigFspoIVBBha-57..-86TTATAAACGTGAGCTCGAAAGGCAACATTA10.7
SigFspoIVBCac-46..-75GCATAATTAAATTTTAAAATGGGAAATTTA12.4
SigFspoIVBBbu-187..-216GATTAATAAATTTAAGCTATGGAGAATCTA9.2
SigFywhEBsu-32..-61GTTTAAAAACGATCTTTTTTTCTCATAATA9.4
SigFywhEBha-169..-197GTGTATGAACGAATGTTCAGGTAAGACTA11
SigFywhECgl-160..-188GCACAATTGTGAAGATCGGGGGCAAACTT10.2
SigFywhENos-151..-180TCTTATGAATCACTAAAAATGGAGAAAATA10.8

position : counted from translation start site.