Transcription factor: AhrC

Factor type ArgR(Unique)
SWISS-PROT P17893
SubtiList BG10309
Consensus seq. CATGAATAAAAATg/tCAAg/t (compiled consensus)
Comment novel mode of DNA recognition
represses the arginine biosynthesis genes and activates the arginine catabolism genes
positive role of AhrC may involve protein-protein interaction with RocR
Link toPhylogenetic profile , Weight matrix & Motif alignment

Regulated
gene
Operon Sigma Regulation Absolute position Location Binding seq.(cis-element) Exp. Reference Year
argC ND ND Negative 1194245..1194262 -61:-44 AATGAATAAAAATATTAA
GS FT Czaplewski LG, et al. 1992
argC ND ND Negative 1194274..1194290 -31:-14 AATTAATTTTTATTCAT
GS FT Czaplewski LG, et al. 1992
argC ND ND Negative 1194421..1194438 +116:+133 ATGCATACTTTATTCATC
GS FT Czaplewski LG, et al. 1992
rocA ND SigL Positive 3879572..3879590 -18:+1 CTTGCATTTTTATTCATAT
GS FT Klingel U, et al. 1995
rocD ND SigL Positive 4144578..4144595 -18:-1 CTTGCATTTATATAAAGG
GS FT Miller CM, et al. 1997




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp