Transcription factor: BkdR

Factor type
SWISS-PROT P54529
SubtiList BG11721
Consensus seq. TGCAAATGAAGGCA(forward), TGCAATAATTTGCA(forward), TGCAGATGTTTGCG(reverse)(plausible)
Comment
Link toPhylogenetic profile , Weight matrix & Motif alignment

Regulated
gene
Operon Sigma Regulation Absolute position Location Binding seq.(cis-element) Exp. Reference Year
ptb yqiS-bcd-buk-lpdV-bkdA1-bkdA2-bkdB operon(bkd operon) SigL Positive 2503989..2504002 -118:-105 TGCAAATGAAGGCA
DB Debarbouille M et al. 1999
ptb yqiS-bcd-buk-lpdV-bkdA1-bkdA2-bkdB operon(bkd operon) SigL Positive 2503965..2503998 -114:-81 AATGAAGGCATGCAATAATTTGCAGAATAAACGC
DB Debarbouille M et al. 1999
ptb yqiS-bcd-buk-lpdV-bkdA1-bkdA2-bkdB operon(bkd operon) SigL Positive 2503954..2503967 -83:-70 CGCAAACATCTGCA
DB Debarbouille M et al. 1999




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp