Transcription factor: GlnR

Factor type MerR
SWISS-PROT P37582
SubtiList BG10424
Consensus seq. TGTNA-------TNACA
Comment originally identified as a repressor of glnRA operon
binds to the same sequence with TnrA (activator)
Link toPhylogenetic profile , Weight matrix & Motif alignment

Regulated
gene
Operon Sigma Regulation Absolute position Location Binding seq.(cis-element) Exp. Reference Year
glnR glnRA operon SigA Negative 1877073..1877089 -58:-42 TGTTAAGAATCCTTACA
DB FT Gutowski JC, et al. 1992
glnR glnRA operon SigA Negative 1877096..1877112 -35:-19 TGACACATAATATAACA
DB FT Gutowski JC, et al. 1992
nasA
SigA Negative 362395..362413 -58:-42 GTGTCACAAAAACTTACAC
DP SDM Nakano MM, et al. 1995
nasB nasBCDEF SigA Negative 362395..362413 -58:-42 GTGTAAGTTTTTGTGACAC
DP SDM Nakano MM, et al. 1995
ureA ureABC SigA Negative 3768947..3768963 +7:+23 TGTAAACTTTTATAACA
DB DP PE Wray LV Jr, et al. 1997
ureA ureABC SigA Negative 3769052..3769068 -99:-83 TGTGAATAAATATAACA
DB DP PE Wray LV Jr, et al. 1997




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp