| Factor type | LuxR/UhpA |
|---|---|
| SWISS-PROT | P13792 |
| SubtiList | BG10363 |
| Consensus seq. | TT(A/T/C)ACA-N3 to N7-TT(A/T/C)ACA |
| Comment | PhoP is phosphorylated by PhoR sensor kinase PhoP~P binds to DNA only(?) under phosphate starvation condition A consensus core PhoP-binding region composed of four TT(A/T)ACA direct repeats each separated by 5+-2 non-conserved nucleotides was identified. |
| Link to | Phylogenetic profile |
| Regulated gene |
Operon | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|---|---|
| glpQ | glpQ | SigA | Positive | 233917..233992 | -1:-76 | AGCATGTTTAAGAAAGACACATAAAAGATTAATAGTTTTCCAACA CGCCGTTTACATCCGTTTTTTATTATGAAAG |
HM | Antelmann, H., et al. | 2000 |
| phoA | phoA | ND | Positive | 1017790..1017853 | -87:-25 | GCGTTTTTTCATTTCCTTACAA--GGCTTTCATTATTGTTTAC ATGA--TCAACAGCCGCATTTAACA |
DP GS RO FT | Liu W, et al. | 1998 |
| phoB | phoB-ydhF | ND | Positive | 621075..621133 | -65:-6 | TCTTGTAAATCCAATCTTTAAAATCGATTAATACTAGC---TT AACAGTTTAAAAATATAAT |
GS FT | Liu W, et al. | 1997 |
| phoD | phoD-tatAD | ND | Positive | 283460..283509 | -66:-17 | TTCAGCGCTTACAATCAGTTCACACTTCTTCACAGTCGTTTAA CAATGAT |
PE FT | Eder S | 1999 |
| phoP | phoP-phoR | SigA | Positive | 2977658..2977706 | ND | AAACGTCTTTATTTCTTTTAAAAATGATGTAAAAGGCGAATTGT CGGAA |
Northern blat, PE, FT ND |
Pragai Z, et al. |
2004 1994 |
| phoP | phoP-phoR | SigA | Positive | 2977606..2977639 | ND | ATAAAATCATGAAACATGTTAAGATGACATAAAA |
Northern blat, PE, FT ND |
Pragai Z, et al. |
2004 1994 |
| pstS | pstS-pstC-pstA-pstBA-pstBB | ND | Positive | 2580906..2580956 | -66:-15 | CACTGATTTACAAAACCTTAACATTCGGTTCAAACCCTT--TT TACATAGAAC |
DP GS FT | Liu W, et al. | 1998 |
| resA | resA-resB-resC-resD-resE | ND | Positive | 2420573..2420640 | -72:-6 | ACGCTTTCTAAATTTCACATAACCTTCAAAAAGTAAGAAATGTGAA ATGAACGTGCAATGATATAATT |
GS FT | Birkey SM et al. | 1998 |
| resD | resD-resE | ND | Negative | 2417097..2417166 | -45:+132 | CGACACAGTTCTCAAACTTTCTCACGATTTGATAAAATGAAAGTAA CAGAAGGAAAGCAGGGGGAAAACA |
GS FT | Birkey SM et al. | 1998 |
| tagA | tagA-tagB | ND | Negative | 3680255..3680340 | -70:+16 | GGAAACATATTTAAATTTAATGTAAAGATAATGTTAATCCTTTGTTGAAG ATTTATGTTAAAATATAAGGTAGCTTGATTTTGCTT |
DB FT | Liu W, et al. | 1998 |
| tagA | tagA-tagB | ND | Negative | 3680352..3680381 | +28:+57 | CGGTTTTTAACTATATAAATAGAATCTTAA |
DB FT | Liu W, et al. | 1998 |
| tagA | tagA-tagB | ND | Negative | 3680405..3680445 | +79:+115 | AACAGAGACTATTCACAATATTCCTTATGTTAACAGTAACT |
DB FT | Liu W, et al. | 1998 |
| tagD | tagD-tagE-tagF | ND | Negative | 3680144..3680204 | -81:-12 | GTCTGAGTGTAATTACATATTTTGGAATGTTTTTCTCCTCATGAGTACTT AACCTTTTTTA |
DB FT | Liu W, et al. | 1998 |
| tagD | tagD-tagE-tagF | ND | Negative | 3679954..3680000 | +122:+168 | ATGAAAAAAGTTATCACATATGGAACTTTTGATTTACTGCATTGGGG |
DB FT | Liu W, et al. | 1998 |
| tagD | tagD-tagE-tagF | ND | Negative | 3680016..3680043 | +79:+106 | TGTTTTTAATAGTGTTTAACATTAGGAA |
DB FT | Liu W, et al. | 1998 |
| tuaA | tuaABCDEFGH | ND | Positive | 3657983..3658027 | -62:-18 | ATTCACA-CTTCTTAACATACCATTTACATCCAA--TTAACA TCCGTC |
DB GS FT | Liu W, et al. | 1998 |
| yhaX | yhaX | SigE | Positive | ND | ND | ND |
DB | Pragai Z, et al. | 2002 |
| yhbH | yhbH | SigE | Positive | ND | ND | ND |
DB | Pragai Z, et al. | 2002 |
| yjbC | yjbCD | SigB | Positive | ND | ND | ND |
ND | Antelmann, H., et al. | 2000 |
| ykoL | ykoL | SigA | Positive | 1397389..1397448 | -72:-13 | AAAATCTTCGTAAACATAAATTCTTTACATTAGATTCATACCAC GTTCATTTAAAAAGAG |
beta-gal, PE | Robichon, D., et al. | 2000 |
| yttP | yttP | ND | Positive | ND | ND | ND |
DB | Pragai Z, et al. | 2002 |