| Factor type | |
|---|---|
| SWISS-PROT | P19940 |
| SubtiList | BG10236 |
| Consensus seq. | GHATR(-35), GG-CATXHTA(-10) |
| Comment | RNA polymerase sporulation-specific sigma factor (Sigma G) Control of transcription in the forespore at late stages of sporulation Null mutations prevent activation of Sigma K inactive in a spollla mutant |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|
| bofC | bofC | 2836668..2836714 | ND | ATAAAACGGTTAAGCAGTAGCCTCTTTGGTCAAACTAATCATAA ACG |
PE, beta-gal | Gomez M, et al. | 1997 |
| cotK | sspO-sspP | 1925666..1925714 | ND | GCTCTCTCATATAACACAATAAAAGAAGCCATATTATGATTGAG GTGAT |
PE | Cabrera-Hernandez, A., et al. | 2000 |
| csgA | csgA-ybxH | 227980..228033 | ND | ATTTTTCGCGTATGGATTTTCCCTATTTTAGCAAGCTATAGGGTAA AGATAGCA |
ND | Shchepetov M, et al. | 1997 |
| dacF | dacF-spoIIAA-spoIIAB-sigF | 2445475..2445514 | -37:+3 | GGCGTATAAAACCATC-ACGCTTGGAAAAAATAAAAAGGAT |
beta-gal, PE, HM |
Wu JJ, et al. Schuch R, et al. Gomez M, et al. |
1992 1994 1996 |
| gerAA | gerAA-gerAB-gerAC | 3389741..3389781 | ND | CACAGTATATCATTTTT--TTAACAGGAAAAGATAACCTCTAC |
beta-gal, PE, HM | Fevers IM, et al. Gomez M, et al. |
1990 1996 |
| gerBA | gerBA-gerBB-gerBC | 3687763..3687816 | ND | TTTTCCTCGATAAGAATAATTCTCCTTTTTTGATACAAATTAATAAAA ACCGTC |
PE | Corfe BM, et al. | 1994 |
| gerD | gerD | 159080..159138 | ND | GTTATGTATAATTCCAAA-CAGATGAATCATATTAAAGGTAAGA CAAGTATGTGAAAGGA |
ND | Kemp EH, et al. Gomez M, et al. |
1991 1996 |
| gpr | gpr | 2634857..2634897 | ND | TTTAGCATGATTTATTCAGCAAATGGCAACAATATAGGTAC |
ND | Sussman MD, et al. Gomez M, et al. |
1991 1996 |
| rsfA | ND | ND | ND | ND |
ND | Juan Wu, L., et al. | 2000 |
| sigG | ND | 1604857..1604915 | ND | GCAGTGCATATTTTTCCCA-CCCAAGGAGATACTTAACGTTGTA CAGCAGCTCCTGTAGG |
ND | Cutting S, et al Sun DX, et al. Gomez M, et al. |
1991 1991 1996 |
| sleB | sleB-ypeB | 2399295..2399341 | ND | AAAGAGTGTATAAAAATAA-CCTCGTTACAGAAAATACGATTAC ACTT |
Moriyama R, et al. | 1999 | |
| splA | splAB | 1460706..1460749 | -40:+4 | TTTTTTTCATAAGTAAGGGTATAGAAGGACACAATAACATGGCT |
DB, RO | Pedraza-Reyes M, et al. Fajardo-Cavazos P, et al. |
1994 2000 |
| spoIVB | ND | 2519669..2519708 | ND | CAGTTATAAATAAGCCGTCAGAAGGCAAAATTAAATGATG |
ND | Gomez M, et al. | 1996 |
| spoVAA | spoVAA-spoVAB-spoVAC-spoVAD-spoVAE-spoVAF | 2442500..2442557 | ND | GATGAATGAGAACAAA-ATCGAACCACATACTACATATATAA CCACCGAAAGATGGTGA |
ND | Gomez M, et al. | 1996 |
| spoVT | ND | 63977..64016 | ND | GGTGTATATTACATTT-GATGTGACGGATACTAATTTCAAG |
ND | Bagyan I, et al. Gomez M, et al. |
1996 1996 |
| sspA | sspA | 3024699..3024749 | ND | TTCTGAATGAAGCCATGTGTTTTGACACATTCTATACTCACAAGG AGGTGA |
ND | Nicholson WL, et al. Gomez M, et al. |
1989 1996 |
| sspB | sspB | 1049652..1049698 | ND | CTCCGCATGATTTTCCGGCCATTTTAACATAATACGTAGTAACAA GC |
ND | Nicholson WL, et al. Gomez M, et al. |
1989 1996 |
| sspC | sspC | 2155358..2155403 | ND | GCGTGTATAAATTAAAA-TAATCTCTCCATAATATGATTCAAACA AG |
ND | Nicholson WL, et al. Gomez M, et al. |
1989 1996 |
| sspD | sspD | 1413334..1413380 | ND | GCCAGCATAAATAAACCCCGTATATTTCAAACTAAATACGCGTTA AG |
ND | Nicholson WL, et al. Gomez M, et al. |
1989 1996 |
| sspE | sspE | 937180..937229 | ND | AGAGGAATAGCTATACGATCACCTGCACATTCTAATGACC GTGGAGGTGA |
ND | Gomez M, et al. | 1996 |
| sspF | sspF | 53081..53131 | ND | TTTAACGAAAGTTCCAT-CTGATTTAACAAAAGATAAAACAGTCA CATATTA |
ND | Stephens MA, et al. | 1984 |
| sspI | ysfA | 2930688..2930734 | ND | AGAACAGCACATAATAAACCAGGTGCAGGGTTAGAATATACGTA TTA |
PE | Cabrera-Hernandez A, et al. | 2000 |
| sspI | ysfA | 2930667..2930713 | ND | ACATGATGTTATTATATCGCAAGAACAGCACATAATAAACCAGG TGC |
PE | Cabrera-Hernandez A, et al. | 2000 |
| sspJ | sspJ | 3420662..3420704 | ND | TATCCCGCATAATTTTTCAGGAAAAAGGCATCTTAAACATGTA |
ND | Bagyan I et al. | 1998 |
| sspK | sspK | 927648..927694 | ND | TAACGCTTTATTACGTGGTGTTCTCCATATACTAACCTTACGTC TTC |
PE | Cabrera-Hernandez, A., et al. | 2000 |
| sspL | sspL | 2310004..2310042 | -39:-1 | AAAAGAATTAAATCTTGATCATTGGTTCATCCTAATGGC |
PE, beta-gal | Cabrera-Hernandez, A., et al. | 1999 |
| sspM | sspM | 2338812..2338858 | ND | AAAAATTGTATGATCCTCCTCATTAATGCAAACGATACTTGTGA GGA |
PE | Cabrera-Hernandez, A., et al. | 2000 |
| sspN | sspN-tlp | 1929419..1929458 | -40:-1 | GTATTCATGTTTACCCCTCCTTTTGAGAAACCTATCTGTT |
PE, beta-gal | Cabrera-Hernandez, A., et al. | 1999 |
| ybaK | ybaK-cwlD | 156046..156092 | ND | AATTCGGGCATTGTTTCATCATCCAAACCTCAAAATAATCGGTA AAA |
PE, Northern blot | Sekiguchi J, et al. | 1995 |
| ycxE | ycxE-gdh | 443958..444004 | ND | TTCCGGCGAATAATCACAA-CAATTCCAGCCAAAATAACAGCAA ATAC |
Rather PN, et al. | 1988 | |
| yfjS | yfjS | ND | ND | ND |
beta-gal, Northern hybridization | Fukushima T, et al. | 2002 |
| yfjU | sspH | 884908..884949 | -40:-1 | TAAAGCATACTTCCTTCAGGAAATGGAAACGTTATGTATTGA |
PE, beta-gal | Cabrera-Hernandez, A., et al. | 1999 |
| yhcN | 988294..988340 | ND | TTTGCATGCATAATTAAAG-CCAGTTAGAAAAACCTATAAGTAA AGTG |
Bagyan I, et al. | 1998 | ||
| ykvV | ykvV | 1449888..1449929 | -33:+9 | AAGGATGATAAAGGAACAGCAGGGGCAAGCTAATTGAAAAGC |
Northern blot, PE, beta-gal,immunoblot analysis | Imamura D, et al. | 2004 |
| yqfS | yqfS-yqfU | 2593463..2593502 | -40:-+5 | AGCCTGGGTATAAAAAGAAAATGAGCTATGAGATGGAGAAAATC A |
PE, Northern blot, RT-PCR | Urtiz-Estrada, N., et al. | 2003 |
| ywhE | ywhE | 3848774..3848820 | ND | CTGCGATGTTTAAAAACGATCTTTTTTTCTCATAATAGTAGAAA CAT |
beta-gal, PE | Pedersen LB, et al. | 2000 |