Transcription factor: SigM

Factor type
SWISS-PROT ND
SubtiList BG13019
Consensus seq.
Comment ssential for growth and survival in high concentrations of salt; expression positively autoregulated through a sigma-M promoter; expression maximal during exponential growth and increased in high concentrations of salt; activity negatively regulated by YhdL and YhdK
Link toPhylogenetic profile

Regulated
gene
Operon Absolute position Location Binding seq.(cis-element) Exp. Reference Year
sigM ND 1029391..1029434 ND GTAATGTGCAACTTTAAACCTTTCTTATGCGTGTATAACATAGA
PE Horsburgh MJ et al. 1999
ywoA ND 3757506..3757549 -38:+6 TTATTTGAAACTTTTCATGAGTAAGATTAGTCTACTAAATATAA
HB, PE Cao, M., et al. 2002




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2004
Contact: knakai@ims.u-tokyo.ac.jp