| Factor type | |
|---|---|
| SWISS-PROT | P35165 |
| SubtiList | BG10536 |
| Consensus seq. | TGTAACN(17)CGAC |
| Comment | ECF-type sigma factor |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|
| abh | ND | 1517073..1517114 | ND | CGGGAAACTTTTTCAAAGTTTCATTCGTCTACGATATATTGA |
Other | Huang X, et al. | 1998 |
| csbB | ND | 930038..930079 | ND | ATTGTAACAAAAAACAG-GTTTAAACGACTTTAAAAAAAGGAA |
Other | Huang X, et al. | 1998 |
| divIC | ND | 69016..69057 | ND | TTTGAAACTTCTTCCTGTGAAAATGCGTCTAACTTTTAGACG |
Other | Huang X, et al. | 1998 |
| dltA | dltABCDE | 3951054..3951103 | ND | AAAATGAAACTTTTTGAGCATCTGATCGTCAAATAATCATGT GATTGTCG |
ROMA,beta-gal,PE | Cao M, et al. | 2004 |
| lytR | ND | 3662191..3662232 | ND | AATGAAACTTTTTTTTA-TAAAAAACGACTATTTTAGGATTTC |
Other | Huang X, et al. | 1998 |
| pbpX | pbpX | 1765049..1765105 | ND | tttttgacAACTTTTttagggctttattCGTCtaacaaa |
ROMA,beta-gal | Cao M, et al. | 2004 |
| pssA | pssA-ybfM-psd | 247660..247706 | ND | TTCCTGTAACGCTATTCGATCACTATCGTCAAATAATATAGATG GTT |
ROMA,beta-gal | Cao M, et al. | 2004 |
| rapD | ND | 3743292..3743333 | ND | AATGTAACCAACTGTCAATGAGAGCCGTCAAAAGTTATGATA |
Other | Huang X, et al. | 1998 |
| sigX | sigX-rsiX | 2414418..2414459 | ND | AATGTAACTTTTCAAGCTATTCATACGACAAAAAAGTGAACG |
RO,PE,beta-gal Other |
Huang X, et al. Huang X, et al. |
1997 1998 |
| yrhH | ND | 2777728..2777769 | ND | ATTGAAACATTTTTCAATACATTGCCGTCTAGTTGGTACCTT |
RO | Huang X, et al. | 1998 |
| ywbN | ND | 3927055..3927096 | ND | TACAAAACAAATGATCAGTCCTATACGTCTTATGATAAATTA |
RO, PE | Huang X, et al. | 1998 |
| ywnJ | ywnJ | 3758641..3758693 | -44:+9 | TTTTTTTCTGTTACTTTTTGCTTTGTTTTACCGTCTATGTAGTTA CATGTAGG |
ROMA,beta-gal,PE | Cao M, et al. | 2004 |
| ywoA | ND | 3757506..3757543 | -38:-1 | TTATTTGAAACTTTTCATGAGTAAGATTAGTCTACTAA |
HB, PE | Cao, M., et al. Ohki, R., et al. |
2002 2003 |