| aprE_2 | TATCATCATG-CTTTGAAAA-----AATATCACG-----ATAATATCCATTGTTCTC-- |
| nprE_1 | -------CTTGACTCATCTT-----GATATTATT-----CAACAAAAACAAACACAGGA |
| aprE_3 | ---------TAGCGAGAGAT-----GATATACCT-----AAATAGAGATAAAATCATCT |
| sinI_4_compl | ATCACCAGAA-TTTTTTTCC-----AATATACCT-----TTATTATAATCGTATTTT-- |
| sinI_3_compl | TGGTAAAAAAGTTAGCTTGA-----AATATTATT-----TTGCAGATAAAACAATCC-- |
| sinI_1_compl | TGGTAAAAAAGTTAGCTTGA-----AATATTATT-----TTGCAGATAAAACAATCC-- |
| aprE_4 | ----AAAATGGGTCTACTAA-----AATATTATT-----CCATCTATTACAATAAA--- |
| sinI_2 | ---TAACTTTTTTACCATTC-----GACATCATT-----CTCGTTTTTTTTGAGAAAAT |
| yclF_2 | ----------ATGATTGAGG-----AATATGATT-----TTATTTATGC---------- |
| yclF_2 | ----------TTTGCTGTTC-----AATATGATT-----GACCTTGCCC---------- |
| yclF_1_compl | ----------CCTGATCAAT-----AATATAATT-----TCTCAAATTA---------- |
| yclF_1_compl | ----------TTCTTTTGCT-----AATATAATT-----AATCCGGCAC---------- |
| aprE_1_compl | TTTCAAAGCATGATGATAAA-----AGTATTCTG-----AAAAATAAACTTTACAGAAA |
| nprE_2_compl | ACTTTATATTGTTATATTAA-----ACTAGCATT-----CTGGAATACTC--------- |
Link to : Weight matrix