| clpE_4 | CCGTATACTAAT---AGTCAAAGAAGGTCAAA---CCCAATAGACCTTTT- |
| clpE_3 | TAAAAATCAATT---GGTCAAAGATAGTCAAA---TATTCAGTCTGCTTT- |
| clpE_1 | ATAAGACTTGAA---AGTCAAAGATAGTCAGA---GTATACTATTAATCA- |
| clpE_5 | TTCACTTTCATT---GGTCAAAGATGATCAAA---TTATTAAGGAGGTTTT |
| clpC | --GTAAGATTAA---AGTCAAATATAGTCAAA---GTCAGTAAAGGAGGGG |
| clpE_2 | GAGTATACTATT---AATCAAAGTTGGTCAAA---CAAACCGGCCTTTTTT |
| clpP | --ATACATTTTT---GGTCAATAAAGGTCAAA---CAAAAAGCTG------ |