SigA alignment

abnA ---------------CTATTTTTTTGTC--TGTACA--------AATTACAGCATAGTGAC--TACAAT--AAAGGG/G/ATACCG--------------------------
abrB -------------TAGTAAACAAAATGA--TTGACG--------ATTATTGGAAACCTTGT--TATGCT--ATGAAG/G/TAAGGAT-------------------------
ackA -------------------CAAGTTGAC--TTGAAA--------AGCCGACATGACAATGT--TTAAAT--GGAAAA/G/TCAGA---------------------------
acsA -----------GGTTTATATTTTAAAAA--TTGAGA--------AGAATATGAATATATAC--TATAAT--AATTGT/G/ACAACTTCAGCAAAGGG---------------
acuA -------------AAAATATAAACCATG--TTGAAA---------ACGCTTTATAATTTGG--TATTCT--TAAAGA/A/GGCATGTATTTTTGATA---------------
adaA --------------ACATTCTAACCACC--TTATTT--------TTTTCTATTTATGAGGT--TATAGT--GTAGTT/A/TCAAGAATGCTAAACGG---------------
addB -------------ACCAATAGATCAGAT--TGGTCA--------TTTTCGTCAACATTCGA--TAAAAT--ATAG/AG/AGATAAAAAGAGAGGGGT---------------
ahpC ----------------------TATGGC--TTGACA--------AAAAATATATATTAATT--AATAAT--TCATAT/A/TAATT---------------------------
ald -------------TTTCTTAATCAAACA--AAGAAT--------TTTCCAAAATATCAAGC--TACACT--AAAAAT/A/TCACATATACAGGAGGA---------------
alkA ---------------GCAAGATAACAAA--ATGAGT---------AAAGATGATTATGTGA--TAAACT--AATTTC/A/ACCAGCGTGAGTTTTCT---------------
alsS ------------------GAATCGATAT--TGGAGG--------TCAATTTCCAAAGAGTG--TATAGT--GAAACTT/A/TCACAAGATATTTAAA---------------
amhX --------------------TTAATTAT--TCTGAA---------TAGTAGCAATATGTGC--TATATT--ATATAC/A/GCCTATCTTCCTGTTT----------------
amyE --------------TTCACTCTGCCAAG--TTGTTT--------TGATAGAGTGATTGTGA--TAATTT--TAAATGT/A/AGCGTTAACAAAATTC---------------
ansA -----------------ATAATAATGTC--TTGCGT--------ATTTTATTTTCCGTGTC--TATAAT--TGCAT/T/AAAAGTATGCGAAAAGCG---------------
antE -------------------------CTT--TTGTAT--------TTATTAACAAATGATGG--TAAAAT--TTCTTC/A/GGAG----------------------------
aprE --------------CTCAAAAAAATGGG--TCTACT------AAAATATTATTCCATCTAT--TACAAT--AAATTC/A/CAGAATAGTCTTTTAAG---------------
aprX --------------------------AC--TTACCA--------AACCTATCATCTGTTCA--TAGAGT--ATACAG/A/GAACCTTATAA---------------------
araA -----------------------AAAGA--TTGACA--------GTATAATAGTCAATTAC--TATAAT--AAAATT/G/TTCGT---------------------------
araE ------------------------AACA--TTGACA--------GAAAATGCAAACAAGAT--TATTCT--ATATTT/G/TACG----------------------------
araR ------------------------AATG--TTTTCT--------TACAAAGAACGCTGTGA--TATACT--GAAATTT/G/TCCGT--------------------------
argC -------------------AATATACGA--TTGAAT---------TAATTTTTATTCATGT--TATAAT--GTTAAAT/A/ATTTCACAAAGACCAA---------------
arsR -------------------------TGC--TTGCAT-------TATTTTAAAAATCATGAG--TATAAT--AAATAC/A/TCAA----------------------------
asd ---------------------AATTCGG--TCATCA---------CCCGCATATTCTATGG--TAAAAT--AAAACG/T/AAAATCATAGTCAAATC---------------
bglC --------------AGAAATTAGGTTGA--TAGACA--------ATCATGAGAAAGATTTT--TACAAT--GAGTTC/GT/GCTCATAAGAAGTGTA---------------
bglP ----------------AAAATGAAAGCG--TTGACA--------TCTCACGAATCTAGTGC--TAAAGT--ATACCT/AC/A------------------------------
bglS --------------TTTCCCTGATGATA--TTGACC---------TAGTACAAAAAGAATG--TACAAT--CAAGAT/A/TAGT----------------------------
blt ------------------------CTCC--TTGACT------ATACGGTAACCATATACCT--TATGAT--TTGATT/G/TAC-----------------------------
bmr ------------------------TCCG--TTGACT------CTCCCCTAGGAGGAGGTCT--TACAGT--ATAAGG/G/ATA-----------------------------
bsrB --------------------CTGACCTC--TTGATT--------AAAAGCGCCTGATGGTG--TACTAT--ATTAAA/G/AAGCT---------------------------
ccdA ------------------------TCAA--ATGAGA-----AGGAGTATAATGTCTCAATG--TCAAAT--TAAATTAT/A/TAAG--------------------------
ccpC ------------------------GGGC--TTGAAT-------AAGAAACTAAGATTTTAT--TAGAAT--GGGAGATAAG/A/AAAACTTAT-------------------
cdd -------------TTTTTAGAAATGGGC--GTGAAA--------AAAAGCGCGCGATTATG--TAAAAT--ATAA/A/GTGAT-----------------------------
cggR --------------------CTTAACAG--TTGAAT--------AAACAATTCCACCCTGT--TAAAAT--AATTA/AA/GAAAGCAGAAAT--------------------
citA ----------------CCCTTTAAAATA--TTGATT--------ATTTTTTAAATATTATA--TTTACT--ATAATA/A/CAGAAAAGGATAGGGGG---------------
citB ---------------AAAAACATTGATA--TTTACT--------TATGTATGATTTTGTTT--TAATAT--GAAATT/G/TGAGAAAATTGTGATGG---------------
citM -----------ACAAAAAAACCAAATTA--TTTACT----------TGCGGTTGGTTTTCC--CATACG--ATGG/CA/AAAAGGCAAG-----------------------
citR ----------------CCCTATCCTTTT--CTGTTA--------TTATAGTAAATATAATA--TTTAAA--AAATA/A/TCAATATTTTAAAGGGAA---------------
citZ ---------------TATAGGTAAACAT--TTAACA--------AATGTCTGATTATTGTT--TATAAT--GAGAAT/A/GGCTTAAACTTAAATAA---------------
clpE ------------------------AGAC--TTGAAA--------GTCAAAGATAGTCAGAG--TATACT--ATTAAT/C/AAAG----------------------------
clpE ------------------------TGGT--TTGAAT---------GCCGTTAAGTTTGCCG--TATACT--AATAGT/C/AAAG----------------------------
clpP -------------AGGCCAGCTTTTTGT--TTGACC--------TTTATTGACCAAAAATG--TATCAT--GTAACT/A/CATACTTACCTAAAAGGTG-------------
clpX ----------------------AACACA--TTGTTA----CCGTCTTTTTGGAAAGTATGG--TAAAAT--GCAATAC/A/TAC----------------------------
codV ---------------------GTATTGA--TTGCAA-------CCTGAGCGCGATTTGTGA--TACCAT--TTAAAA/G/CCCTT---------------------------
comA ------------------CGGAAACGAC--TTGGCA---------CAGGCCAAGTCTTTTT--TATAAA--ATGGA/AA/AGAGTGAGTAAAAGGGA---------------
comC --------------TTGAATATTCCCAA--TTGGAG------CTCAGGATGTCCATTTTGC--TACAAT--CCATACCA/G/AACTCAATGAGTAAA---------------
comEA ------------ATGCTTTTTTATGCTT--TTGCAG--------TACAGACGAACGTATGA--CATACT--CGTCT/A/CACATGAAACTGCTTTTT---------------
comFA ----------------TATTTTAATAGT--TGGACA--------GAAAATATTCATTCAGG--CATACT--GTTTC/G/AAAGGAGGCGTGCTATGT---------------
comGA ---------------ACGTTTTCCCTGT--TTGATT--------ACCTTTTCTTCTTTTTC--TACAAT--ATGCGTT/G/AAAGGAGAGGGAATCA---------------
comK -------------AAATGTTAAAAAAAC--CTGTCG-------TTTTACAAAAACAGATGA--TAGATT--ATTA/G/TATAAATTTTGCAGAAAAA---------------
comQ ------------AAAAACGAAAAACCTG--CTGTCC-------TTTAAATGTCCCATTTAG--TAAAAT--GGAAT/G/GGAGGGGGGAAGTCGTT----------------
csbA ------------------------ACGA--TTGTCC--------GATTCTTCATTTTTTAC--TATAAT--CAGATCA/G/ATG----------------------------
cspB -------------AATTTCAATAAGCAG--TTGTTT--------TTTCTGAAGATTACTGG--TAGAGT--AAAGGT/A/ATTATTTTTGTTCGAAC---------------
ctaA ------------------------GGAA--TTGCCA--------CAAAACACATATTCGCT--TACACT--TGGAAC/G/TATATAAA------------------------
ctsR --------------------CGAGAAAG--TTGAAA--------ATTCTCGAGAAACGGCT--TATAGT--AAGATT/A/AAGTCAAA------------------------
cydA -------------------------GGC--TTTATT--------TTTGAAATGAATCGTTG--TAAAGT--ACTTAAT/A/TGAACCAG-----------------------
cysH ---------------------AGTCGGG--TTGACT---------TATGTTAGAATTGTGC--TAAAAT--TTAC/T/ACAAATCTAAAAACT-------------------
cysK ----------------------AAGTGA--TTGACA--------AAAAATTTTGAAATTGA--TAGATT--ATATAC/A/TAATACC-------------------------
dctP --------------------TCATAAAC--TTCCCC--------AGACTGTATGAAAACGC--TATCAT--TCTAGT/AA/GAAAG--------------------------
degQ -------------TTTGCATACTTTTCG--GTGAAA--------AATGAGCCGAAAGCAGA--CACACT--ATTA/G/TAACAGATCAAATACCTAG---------------
degS --------------ATTCGTACAGTCTT--TAGAAT--------TTTTGTGCGTATTTTGG--TATCAT--AAAGAGTAG/A/TAGTATATAAAAAT---------------
dhbA ------------------------ATAT--TTGACT--------GTCACATGACATTTGGA--TATGAT--TATTTT/T/--------------------------------
divIB -----------------TGATTCAAGTT--CTGACT---------GAAGCTGTTCATATGA--CATACT--GTAAGC/A/AACGAACAAACGGCATCA--------------
dnaA ----------------TTGTGACAACCA--TTGCAA--------GCTCTCGTTTATTTTGG--TATTAT--ATTTGT/G/TTTTAACTCTTGATTAC---------------
dnaJ ---------------------AAAGGAA--TTGAAA-------AATCATAATTCAAAATGA--TACAAT--CTAATTTATGTGAGAA-------------------------
dppA ----------------TTCCCAGTTATA--TTGCAT--------TTTTCCTCTTTTTTTAA--TATAAT--TTGTT/A/GAATATTCATAATTTAGT---------------
drm ----------------------AATACA--TTGTCA-------ACGGGAATGAAAACGGTT--TATACT--TGAGTT/G/TCAGACCTCTTAGCGA----------------
drm -----------------------TATAC--TTGAGT-------TGTCAGACCTCTTAGCGA--TACAAT--AGACGT/A/TAGAA---------------------------
fabL --------------------ACCTGGTA--TGGAAT--------ATTTCAGTGTTTTTCGG--TAAAGT--AAAACA/AG/TGT----------------------------
fabL ------------------------TTGA--TTGGCC-------TTCTTCGTTCAAATAAGG--CATAAT--TTGCT/GA/AAGG----------------------------
fbp ---------------------GTTTTAA--TTGTCT-------CTAAAAGCAGTTATGCGG--TACTAT--CATATAAAG/G/TCCA-------------------------
feuA ----------------GGAATTTGTCCA--TGGTGT--------TATATCTGTTCATTCTC--TATAAT--T/CC/AATTGATAA---------------------------
flgB -------------------CGAACTTCA--TAGACT--------TTATGCCTGTTATTTCT--TACAAT--AAGCAT/A/TA------------------------------
ftsA ----------------AAGCCACATTCA--TTGTAT--------TGTTGTTCCGCAAATAA--TAGAAT--AGAAAT/G/ATCGAAATGTGAGGAGG---------------
ftsA ---------------CAATAAGTTTAGC--TTTTCT--------GGGAGTCCATCTTGGTG--TAGACT--TGTATT/T/AGCAGGTATATTCGCAT---------------
ftsH -----------------------ATTGT--TTGTAT-------TGGAATGATTTTCTATGG--TACTAT--TGAACAT/A/GTTGTG-------------------------
fur -----------------------TATAG--TTGGAA--------CTCTGCGCGTATTTTGT--TATAAT--GAGTC/A/T/G/GAATGC-----------------------
gapB --------------TTATCAATATGTAC--TGGCGA---------ATTTGTTTTAATGTGT--TATACT--AATTTT/A/GATAGTAAC-----------------------
gabP -----------------------AATTT--TCGACA---------AACTGTATATTTATGA--TAGAGT--TTCAATT/A/TCATAATA-----------------------
gabP ----------------------AAACTG--TATATT--------TATGATAGAGTTTCAAT--TATCAT--AATATTC/A/GTAATGA------------------------
gabR -----------------TCGGTATTTTC--TTATCA--------TTCTGACTTCTCTTTGG--TATGAT--GAAAA/G/TACCA----------------------------
gabT ---------------------TTGGTAC--TTTTCA--------TCATACCAAAGAGAAGT--CAGAAT--GAT/AAG/AAAATACCGACAGGG------------------
galE ----------------------AAATGG--ATGTGG--------ACCGGTTCTAAACACTA--TATAAT--GAAAAC/A/GGTCATT-------------------------
gcaD ----------------CATGAAGTCTCC--TTGAAA--------TCAGAAGATATTTAGGA--TATATT--TTTCTAT/G/GATAAAAGGGATATTG---------------
ggaA ---TGATGATTTACATTTTTAAAGAGCC--TTAACT--------TTTATAGGAACATATGC--TATTAT--TGTTT/A/T/TA/TTAATGGAACGTAAAAAATATG------
glnR ---------------TCCTTACATCGTA--TTGACA--------CATAATATAACATCACC--TATAAT--GAAACTA/A/GTTAAGAAAAGGAGGA---------------
glpD ----------------GCAGCTATGGCT--TTTAAA---------TAAAGTAATACTATGG--TATAAT--GGTTAC/A/AGTTAATAAGAACGGTC---------------
glpF ----------------GACGGAAAGTGA--TTGACA--------CCGCTTTCATGCACTGA--TACAAT--TGCACT/A/GGTTAATACATTGTGAT---------------
glpQ ----------------AATAGTTTTCCA--ACACGC--------CGTTTACATCCGTTTTT--TATTAT--GAAAG/A/CAGGTAGTG------------------------
glpT ----------------GAAAATTACCCG--TTTACA----------TTCGCTCCGGACTAT--GATAAT--TTAAGA/A/AGCGCTATCATGATAAG---------------
ybgJ ---------AAAATGTTTTTGTCGTATT--TTGTAT--------GATTCTGTAGTCTCCAT--TATACA--GTAATTA/T/ACCTTCCGCTATTATGAAA------------
gltA ----------------CTAAATTATATA--TTGTTT--------ATATCGTTTTGAAAACC--TACAAT--GATTAT/A/GAGTTGTTAGATTTTAT---------------
gltR ----------------TCTAAGCTTTAG--TTTACA-------TGAAGCTCTGCTATCATA--TATAAT--TCAAAATT/A/AGATGGAA----------------------
gltC ------------------TCATTGTAGG--TTTTCA--------AAACGATATAAACAATA--TATAAT--TTAGATC/AA/AAGAATCTCAAAATG---------------
gltX ----------------GGCTAACTTGTT--TTGATG--------CCGGGTCTATTTGGTGG--TAGAAT--AGATTC/A/TACATTTTTGCCTGA-----------------
glyA ------------------------ATCT--TTTACA-------TCGGCCTTAAAAACCATG--TACAAT--AGTGATG/G/TAAA---------------------------
gntR ------------------ATGAAAGTGT--TTGCAT--------AAAAGAAATATTCACGT--TATCAT--ACTTGTAT/A/CAAGTATACTCCTTG---------------
gntZ ----------------------CGTTGC--TGGACT--------GGGATTCATTTTATTGT--TAAGTT--TAGTTGT/AT/GAAATTAAGAAGGAGCTGTAACAC------
groES --------------------CTTATCAC--TTGAAA--------TTGGAAGGGAGATTCTT--TATTAT--AAGAAT/TG/TGTTAGCACTCTTTAG---------------
gtaB -----------------------AAAGC--TTGTTT--------AAAAATGGTTTATCCGA--TATCAT--AAAAAT/G/TGTAAA--------------------------
guaA -----------------AGAAGATGGTC--TTGACC--------GCTTATCGACGTGTTGT--TAGAAT--TAGTGA/A/TATTATCGGAGTCTGGG---------------
guaD ----------------------TTAAGA--ATGTTC--------TTTGCATTCTTTTCGGC--TATACT--AATAAC/A/CTCTATT-------------------------
gudB -------------------TTTATTCTA--TGCACA--------GATCATATGAAGGTGTA--TACTAT--TCTCT/G/AAAGGG---------------------------
gutB ---------------GCAGGAAAGGCTG--TTGAAC----------GTGTTAAAAAGCAGA--TAAAAT--GGGGGC/A/GTAACAGAGAAAACAAA---------------
hbs -----------------------AATGC--TTGATA--------TGGCTTTTTATATGTGT--TACTCT--ACATAC/A/GAAATTCTTCACTTTGT---------------
hbs ---------------------TAAATCC--TTGACG--------AGCAAGGGATTGACGCT--TTAAAA--TGCTTG/A/TATGGCTTTT----------------------
hemA ----------------TTTTAAAATCTG--TTCACA-----TTTTGTGAAAGAAACTATGT--TATAAT--TATTATAAATAATGAGTTCTATGT-----------------
hemZ -----------------------CCGGA--TTGATT--------TTAGCAGTTTATTTCTG--TACACT--AAAGAA/A/GTTTT---------------------------
hrcA --------------TGGGTGAGTTATAA--TTGACA--------TTTTTCTTGTGGTTTGA--TACTTT--TGTTAT/A/GAATTAGCACTCGCTTA---------------
htpG ----------------------ATCTAA--TTGACA--------ATTGTCATCTTATGTGA--TAAATA--GATGCT/G/AAAA----------------------------
hutP ------------------AAAAAACCTT--TTGACT--------TCTGCTGCTGAACCAAT--TAATAT--AATACTC/A/GTTAATAGTTATCAGA---------------
icd ------------------GCCTCTTGTT--CAGACA--------TCAAAATTGGGTTACAC--TTTAAA--TTGAAT/G/TTAGGAAAAATCATTTT---------------
ilvB -----------------AAAAAATGCTG--TTGACA--------CTGCGTCCAAAGCGGCG--TAATAT--GAGTT/C/AACAAAAGATAAATGCAA---------------
iolR -------------------------CTA--TTGATT-------AACTTTTGGTTTTTATTA--TATATT--TATGTT/A/CGTA----------------------------
ydjK ----------------------TTTATA--TTGACT--------GAAAGCGTTTTTATAAT--TATGAT--AATATC/A/GATA----------------------------
kdgR -------------------AAAAAACTC--TTCCCA---------AATTTTAAAATTATGG--TATTCT--TTTGTT/G/TAAC----------------------------
kinB ------------------------ATAT--TTTACT----------TCTAATATTTAGTGT--TATAAT--AGATTC/A/TATTTT--------------------------
kinC -------------------TACATATTT--TACTCA------ATTATTTGTCGAAGAATGG--TACAAT--AAGTAG/A/GAAACACAAGCGGCAGG---------------
ldh ------------------------TCTC--TTGCAA--------AAGTTTGTGAAGTGTTG--CACAAT--ATAAAT/G/TGAAATAC------------------------
lepA -----ACTTTTCTCTTTCTTGTTTTACA--TTGAAT--------CTTTACAATCCTATTGA--TATAAT--CTAAGC/T/AGTGTATTTTG---------------------
licB -----------------------CTGAG--TGTTTA--------TGAAAGCGATTTCATAA--TATGAT--GATAGC/A/ACAGC---------------------------
licR -----------------------GTTCA--TTGACT--------TGCCATTCTCTCCATTA--TAGAAT--TTAT/A/TAC-------------------------------
lmrA ---------------CAATGAATTTTTC--TTGACA--------ATTGATGATTGAATCAA--GATAAT--AGACCA/G/TCACTAT-------------------------
lonA -------------------TCTTTTCCT--TTTTCA---------TATCAGAAAGAAAGGG--TATACT--ACGAGGA/G/ACTGTTTTATAGAAAA---------------
lonA ------------------TGCCGTTTAT--TGTACA-------AGGATGAAAAAGTTGTAT--TATAAT--GGTTCAT/A/CTAAAGTCACGGAGGT---------------
lrpC -------------------GAACTGTAC--TTGTCA--------TTTACAAAAATACCCGA--GATAAT--GTGTA/C/AAAATCAAAAAAGAAGGATGT------------
lysC ----------------GCAAAAATAATG--TTGTCC--------TTTTAAATAAGATCTGA--TAAAAT--GTGAACT/AA/TTTCATAGTTAGATC---------------
lytA -------------------------AGT--TTCATT--------GTTTCTTAATTTTTCTT--TAAAAT--ATAAAAT/A/GGTTGA-------------------------
lytR ------------------------AGAG--TTGTAT--------TTATTGGAAATTTAACT--CATAAT--GAAAGT/A/ATTT----------------------------
malA -----------------------AACGT--GTTACG-------GGACGAGCTATCTCATGG--TATAAA--TGGAATT/G/TAAA---------------------------
mecA ----------------AAGGTTAAGATG--TGGACG--------GAATGGGTAAAGTGTAG--TAAAGT--ACAATTA/A/TCGGGAGCTTAGATGT---------------
med ---------------------AGTGGAA--AAGACA---------ATTTTCATCAATTTTC--GACAAA--TATTA/A/GAAAAACCTT-----------------------
med --------------AGTGGAAAAGACAA--TTTTCA---------TCAATTTTCGACAAAT--ATTAAG--AAAA/A/CCTT------------------------------
menB -----------------ACTCATTCACA--TAGAGA--------ATAAAAGGAGGTCATCA--TATGGC--TGAATGG/A/AAACAAAACGGACATA---------------
menE --------------GCTGTTTTCTTTTC--AATACA---------GACATTTTACCTCGGA--GATGAT--GACATGCT/G/ACAGAACAGCCCAAC---------------
menF ------------------GCTTGTTTCT--TTTTCA---------TTTCTGAAATTAGGTT--TATAAT--AGGTAA/G/GCAGGCCATTTGGACTG---------------
mmsA ------------------------ATGA--TTGACT--------TATGGGTATTATGCGAT--TAGAAT--ATAACC/A/AGAAATG-------------------------
mrgA -CTAAATTATAATTATTATAATTTAGTA--TTGATT---------TTTATTTAGTATATGA--TATAAT--TAAGT/CA/AC------------------------------
mta ------------------------GGGA--TTGACC------CTAACGTTGCGTGATTGTT--TACGAT--AAAAAA/G/AGG-----------------------------
mtrA --------------------CATTCACT--TTGCTT-------TTAGCGGGGCATATGTGC--TAGAAT--CGAAATTAAATGTATTC------------------------
nadB -----------------ATAAAAAACTC--TTGAGT--------TTATTTTATCCTTGTGT--AAATAT--AGGTGTC/A/AGACAGGTGTAAACA----------------
nadE ---------------------TCTCTTG--TTCACA-------GTGAATGAAGACCTGTGC--TATATT--TAATAG/G/GA------------------------------
nasA -------------------CACATGTCT--TTTCCA---------GAAAATAATGGTCCTA--TATCCT--TGATTC/A/GAAAATGTAAAATAATG---------------
nasB ------------------TTGTGACACG--TTTAAT-----GCGTTAACAATGCATTGTGA--CATAAT--TTTTAAT/A/GGAGAAAACTTACGAG---------------
nfrA --------------------TTTCACTT--TTGAGA----------TCACTTTTTTTCGGA--TATGAT--AAAAAG/T/GAT-----------------------------
nifS -----------------TTACACCTGTC--TTGACA-------CCTATATTTACACAAGGA--TAAAAT--AAACTC/A/AGAGTTTTTTATGGAGA---------------
nrgA ----------------TCTTACATGAAA--ATGTTT--------TATCATTCTTTTTTCTC--TATAAT--GAAGAA/A/T/A/TAATAATTGCTTTTT-------------
nusA ----------------GCGTATATCCAT--TTGCAA--------TAAAAATATGGTTATGG--TATAGT--TTTAT/TG/GAAATGCTAACGATTA----------------
odhA ----------------TTTTTTACTATT--TTGTGA---------ACAATCAAGGTAGAAT--CAAATT--GCAAACAG/T/GGTAAAATATCGTTG---------------
ogt ---------------------GGGGAAC--TGGACT-------TGGGCTTATGGTAAGCTA--TAAAAT--TATTGAAGAAC/ATCAA/GGCGAG-----------------
opuAA --------------------GATGTTTA--TAAAGA--------AATGGTACAGAATAAAA--GAGAAT--ATGCTG/T/TTGT----------------------------
opuAA ------------------AATATGCTGT--TTGTGT-------GGGAAGTTACATAAATGT--TACGGT--AATAAAG/A/TTGC---------------------------
opuBA ----------------------GTAAAC--TTTTTA--------TTTTATAAACTTTATTC--TATAAT--GGGAAGC/A/TTCAATTGTCTG-------------------
opuE -------------------------CGC--TTGAAT--------GGCCGGGAATACTTTGT--TAGGTT--AAGTTACC/A/AG----------------------------
pabB ------------------------GAAA--TTCACT--------TTTTTCACTAACAACAT--TGCTTT--ACAATTAAAA/A/CAAGTA----------------------
pbpD ----------------CTAAATTTAACC--TTCTCG--------TAATCTCAAAAGAATGG--TACGAT--ATGGCT/A/GAATTTAGGAGAAAAGA---------------
pbpF ----------------GCCACCTCCTGC--TTGCTA--------GTATATCAAAACAATGG--TATAAG--TTTCTATT/G/GCGAGTGCTTCGAAC---------------
pdhA ----------------------AAGGTT--TTGGCA------AACTGGGGATCGGCTAAAA--TATAAT--ACGACTTACTGCTGATACTTTAGGGTA/C/CCTAAGTTTGT
pdhC --------------------AGACGTTC--TTGAAA----CAGCAAGAAAAGTGCTTGAAT--TTTAAT--CAAACTGCATAATCGAGAGGGAAGATGAA/C/GTTTTCC--
perR -----------------------ATCAA--TTGACA-------AATTATCGTAGAAAGAGT--TACACT--AATTAT/A/AACA----------------------------
pgk ----------------AAAGGACCTGAC--TTGGTT--------CTTTCGAATAGAAGCGC--TATAAT--GAAAGCGG/A/CAAGGGAA----------------------
pheS ------------------------AGTG--TTGCGC--------CAAGCGTTGGATTTCTC--TATAAT--AGAAC/A/TAAT-----------------------------
phoP ------------------------CGAA--TTGTCG--------GAATGTCCTGCTTTCGC--TAAAAT--AAAATCA/T/GAA----------------------------
phoP ----------------------TTTCGC--TAAAAT--------AAAATCATGAAACATGT--TAAGAT--GACA/TA/AAAT-----------------------------
phoP ----------------------ATTATC--CTAATA-------AAAAGAGAGAAAGGCTTG--CTTAAT--ACAGCCTTTC/T/CTT-------------------------
phrE ---------------------------G--TTAGGA----------GGCAACCTTTTCGAT--TATAAT--GGGAA/A/ATAGAGG--------------------------
pmi -----------------------AAAGG--CTGAAA----CAAAGCTTGAAAAGCTGCACA--TATAAT--AGATA/G/GAAGC----------------------------
ppiB ----------------AGCCGCGACAAG--GAGAGA---------CAGGCTATAACCTATA--CATAAT--CTCCTTT/G/AAAATTAAAATAAAGA---------------
pssA -----------------------GCGTC--TTGTCC---------TTTTTATGCGGGGGGA--TAAAAT--AGTAAGGAACATG----------------------------
pssA -----------------------CATTT--TTCAAA----------AGGTAACAAATGTTG--TATAAT--AATAGAATTTGAA----------------------------
pstS -----------------------TTCGG--TTCAAA-------CCCTTTTTACATAGAACC--TTTACT--CTATACGT/G/TAGGAC------------------------
pta ------------------------CTGT--TTGAAT---------TTGATTGGAAGAAGAG--TATGCT--AGTAAA/A/GAAA----------------------------
ptsG -------------------------TGC--TTGTCA--------GATGACAAGTACGGTTG--TATGAT--ATAAT/A/TTGTGAAG-------------------------
ptsH --------------------TGTTGTTA--TTGAAA-------AATGAATATCCGCTATGC--TACAAT--ACAGCTT/G/GAAATT-------------------------
pucA ----------------------CTTCGT--TTGACT--------CTTTTTACAAATCCTCT--TTCTAT--GTGTT/T/CATTTT---------------------------
yurH ----------------------CTGTCA--ATGAAC--------TATCATGTTGCTCCTTC--TATAAT--GAAGTC/A/CCATA---------------------------
pucH ----------------------TTGCTG--ATGTAA--------TACGATCATAGTAGCAG--TAAACT--GTTG/A/AAAT------------------------------
ywoE ---------------------ATAGCCA--GTGTTA--------TTGTCTGACTCTTCAGT--TATATT--AAGTGAC/A/TCTAA--------------------------
pucJ -----------------------ATCCA--ATGACA--------CCCCTCGACCGGAACGA--TATTAT--GTTACT/A/AAGTT---------------------------
purA -----------------CGGATTTACAA--TTGACT--------TTCTGTTTCTTCACTGA--TAAACT--TGATTT/G/TTTGAATAGAATCGTTT---------------
purE ----------------TCGATAATATCG--TTGACA--------TTATCCATGTCCGTTGT--TAAGAT--AAAC/A/TGAAATCAAAACACGACCT---------------
pyrR ------------------------ACGG--TTGACA--------GAGGGTTTCTTTTCTGA--AATAAT--AAACGAA/G/CTG----------------------------
qcrA ------------------------TATA--TTGACC--------TTGCTGAGAGATTCATA--TATTAT--GAGGGT/G/TCTAG---------------------------
rapA -------------TGCGGTTATTTTGCG--TTCTTC-------TTTTTCTTGTAAATATGA--TAAAAT--ATGAC/A/T/A/TCTCGGGTAATTCAAA-------------
rapC -------------------------GGG--TTGGGA---------CGGCCTATAAACATGA--TAAAAT--ATGAC/A/TAA------------------------------
rapG ---------------------------T--TTTACA-------TAAAATAGAAAGAGGTGT--TACTAT--CAG/A/ATAA-------------------------------
rapH ----------------------CTTCCT--TCTATA-------TTGTTTTCAAAATTTGGG--ATTGAT--AGAATA/T/GAC-----------------------------
rbsR ---------------TTTGATATTTTTA--TTGCTA-------ACTTCGGATTGTTCATGA--TAATCT--ATCTAT/G/TAAACGGTTACATAAAC---------------
recA ----------------TTCGCTTTTTTC--TTGGCA--------AATCCCTTCAAACAGGG--TATAGT--ATAT/GT/AGTGGTAACATAAAGGAG---------------
resD ----------------------ACACAG--TTCTCA-------AACTTTCTCACGATTTGA--TAAAAT--GAAAGTA/A/CAGA---------------------------
rpmH ------------------ACTAGTGAAG--TTGACA-------ATGAATAGGTAACGCAAA--TATAAT--AAGTAAGAC/TGT/CTTTAAC/AGC/TATT/CCT/CGA---
rpmH ------------------AAATAAGGTT--TCGAAA-------GTTGAAAAGGTATGGTAT--CCTATT--A/TGGTT/GCAAG----------------------------
rocR -------------------AAAATTCTT--TTGCAT-------ATCCTCTCCGTTTTTTTA--TAAAAT--AGAAGC/A/ATA-----------------------------
rpoB -----------------------AAAGT--TTGACT--------CGGTATTTTAACTATGT--TAATAT--TGTAAAA/T/GCC----------------------------
rpsD -----------------TGGAGGAATGG--TTGACT--------TCAAAACAAATAAATTA--TATAAT--GACCTTT/G/TGTGAAATATTGCAGC---------------
'rrnA-16S' ------------------ATATTATGTA--TTGACT--------TAGACAACTGAAGGTGT--TATTCT--AATATAC/G/TCGCTGATGACGAACAGCTT-----------
'rrnA-16S' ------------------TAAAAAGTTG--TTGACA--------GTAGCGGCGGTAAATGT--TATGAT--AATAAA/G/TCGCTTAAACGAG-------------------
'rrnB-16S' ----------------TTTAAAAAACTA--TTGCAA--------TAAATAAATACAGGTGT--TATATT--ATTAAAC/G/TCGCTGATGCACAGCG---------------
'rrnB-16S' ------------------AAAAAAGTTG--TTGACA--------AAAAAGAAGCTGAATGT--TATATT--AGTA/A/AGCTGCTTCATTGAGAAGT---------------
'rrnD-16S' -------------------AAAAAGGTG--TTGACT--------CTGATTCTTGACCGTGT--TATATT--ATTAAACGTCGCTGATGCGCTTCTG----------------
'rrnD-16S' ------------------AAAAAAACAT--TTGACA--------AAAGAAAGTCAAAATGT--TATATT--AATAAAGTCGCTTCAACAAGAAGT-----------------
'rrnO-16S' -----------------TGTCATAACCC--TTTACA---------GTCATAAAAATTATGG--TATAAT--CATTTCT/G/TTGTCTTTTTAAAGAC---------------
'rrnO-16S' ------------------CAAAAAAGTA--TTGACC--------TAGTTAACTAAAAATGT--TACTAT--TAAGTA/G/TCGCTTTGAGAGAAGCA---------------
rsbR ---------------AGAGCAACTTTTT--TTGTTT--------TCAAAAAACATAAACGA--TATAAT--AGT/G/A/AA/TAACGAAAAAATATGTT-------------
sacB -------------------ATAGACCAG--TTGCAA--------TCCAAACGAGAGTCTAA--TAGAAT--GAGGTC/G/AAAAGTAAAT----------------------
sacP --------------------AAAAATAG--TTGACG--------AAAACGCTATCATGATT--TATGAT--G/AAAGCGT/ATTCTT-------------------------
sacX ----------------CTTTTCATACTA--TTGCTA--------TACAGCCATGAACAGCA--TAAAAT--GAACGTT/A/TTACAGTTATCACCACATA------------
sboA ------------------AATATATGTA--TTGAAT--------TAGTAATTTGATAGTTT--TAAGAT--AAAAGT/A/CAAC----------------------------
scr ----------------------GTACGG--TTGCAA--------TTTTTAGGGGAAACAGA--TATACT--TAAGTGT/G/CATCGTAATA---------------------
sda ---------------------AGAACGA--TTGTTC--------TTATATGCATTTCATGG--TAGATT--AAAGAT/A/ACTT----------------------------
yaaJ -------------------------CAA--TCGACA------GTCTCCTTTCCGTTTCAGT--TATAGT--TAATATGTAG-------------------------------
sdhC -------------------CGCGTTTTC--TTGACG--------CCCTTTTGAGGGAGGAG--TAAAAT--GAAATT/G/TCAATAAATCTTAATAA---------------
secA --------------------CAAATTCT--TTGGAA---------ATAACAAAAGGTATGA--TATGAT--AATGAG/A/GGTATACATG----------------------
sigD -------------------ATATTCGAA--CTGTTA-------AACAAGGTGAAAAAACGA--TTTAAT--TAAGG/T/ATTAGG---------------------------
sigH -------------------TAGATTAAG--TTGACG-------CTTTTTTGCCCAATACTG--TATAAT--ATTTCT/A/TCTACGTGCGCCGGGGG---------------
sigI ------------------------GAAA--GGCACG-------AAATCATGTATAGAACGT--CAGAAT--GGTTTG/T/CATAATTGAGACAT------------------
sigM --------------------CTCCGCAC--TATCTT--------TTGCGGCCATTTTTGGG--TACTAT--ATAGTA/A/TGG-----------------------------
sigX -----------------------TTCCC--TTCCAA--------ATTCCAGTTACTCGTAA--TATAGT--TGTAAT/G/TAA-----------------------------
sinI ----------------------TGGCAA--ATGACT------TCCAGAGACTAATGAAGCA--TACAAT--AAGT/CA/TGG------------------------------
speD -----------------------GCACC--TTGCAA--------ATTAGACTTAAACACAG--TATACT--ATTTTT/C/GTGAA---------------------------
spo0A ------------------CCCTCTTCAC--TTCTCA--------GAATACATACGGTAAAA--TATACA--AAAG/A/AGATTTTTCGACAA--------------------
spo0A ------------------TTGATCCCTC--TTCACT--------TCTCAGAATACATACGG--TAAAAT--ATA/C/AAAAGAAGATT------------------------
spo0E ----------------AATGAAAATATG--TTTACA--------AATAAAGTATAATCTGT--AATAAT--GCACAATA/A/CCCAATCAAACTTGT---------------
spo0F -------------------GAAAATGCT--CAGAAA------ATGTCGTAAAGTAGACTAT--TATAAT--TAAA/G/GAAATAGGAAAATCAAACA---------------
spoIIE ------------------TTACCTTCTT--TTGACA----AAATCCTATCTGTGCTTTCGC--TATAAT--GACAGGCA/A/CGAATATAACAGGTG---------------
srfAA ------------------CCATTTTTCG--GTGATA--------AAAACATTTTTTTCATT--TAAACT--GAACGGT/A/GAAAGATAAAAAATAT---------------
tagA -----------------------TAATG--TTAATC------CTTTGTTGAAGATTTATGT--TAAAAT--ATAAGG/T/AGCT----------------------------
tagD -----------------------AGTAC--TTAACC--------TTTTTTAGGCGGTATGC--TATAAT--TAATGA/TC/AGTG---------------------------
tetL -----------------AAAGTAAAAGT--TTAATC---------CTTAGTCTATATATAA--TAAGAT--CATATC/A/ATCAAATGTAGGGGGAG---------------
thrS -------------------GCGATCGTG--TTGATT--------TTTTGGATTGAACAATT--TATAAT--ACAT/AGG/AGATTAAGAAAGACACA---------------
treP -------------------------GTG--TTGACT--------ACCTGTATATACAGGAA--TACAAT--ATGATT/A/TAA-----------------------------
'trnD-Asn' -----------------------AACAC--TTGATT--------TTCTCAAGAATACATAG--TATAAT--GTTAA/AT/GTCACTGAAA----------------------
'trnD-Leu2' --------------TTTTTTGAAATACG--TTGACA--------CTTTATGAGATCCATGA--TATATT--TATA/TTC/GTCGGTTAGA----------------------
trpE -----------------CCGATTTATCA--TTGACA-------AAAAATACTGAATTGTAA--TACGAT--AAGAAC/AG/CTTAGAAATACACAAG---------------
trxA ------------------------AAAA--TAGCGT--------GAACGAATGGGAGATGC--TATACT--AAAA/A/T/CA/TCATTTCACATTGGAG-------------
tyrS --------------------AGGCGGCG--TTGACA--------CAGGATTTTATTTATGT--TAAAAA--TGATAT/A/GCTTCATATGAAAAGGT---------------
ureA ------------------------TTCT--TTGAAT---------TAATAGGCCTCTTCTA--TATAAT--GATGAC/A/T/A/AGTTG-----------------------
valS ----------------------AGATGA--TTGACG-------AATCAAAAACACTTTTAC--TATAAT--AAAGAAC/A/TAAATAA------------------------
veg -------------------AAATTTTAT--TTGACA--------AAAATGGGCTCGTGTTG--TACAAT--AAATGT/A/GTGAGGTGGATGCAATG---------------
wapA -----------------------AAATA--TTGTAA--------TGATATTTCAGTCTAGT--TAAGAT--TATTGA/G/TAA-----------------------------
xpt -----------------------CAGCC--TATGCA--------AGAGATTAGAATCTTGA--TATAAT--TTATTA/C/AATA----------------------------
xsa ------------------------GTCG--TTGACA--------TGTACGAACATATATAA--TATGGT--TACTT/T/AAAAGCGC-------------------------
xylA ----------------CTAAAAAAAATA--TTGAAA--------ATACTGACGAGGTTATA--TAAGAT--GAA/AAT/AAGTTAGTTTGTTTA------------------
xynP ----------------CTGAAAAAGATG--TTGAAA--------AAGTCGAAAGGATTTTA--TAATAT--TAAGTC/AA/GTT/A/GTTTG--------------------
ybcO ATTTTTAGGATAATATACAAAATCCCCC--TTACTT--------CGACAATTGCAATCTGG--TATTAT--CGTATC/G/CATGGG--------------------------
yccC ----------------------GATCTT--TTGACT--------GAATAGATAAAATGTAC--AATGAT--TAATC/A/TCATA----------------------------
ycdH --------------------ATTTATTC--TTGCAA-------AACGTAATGACTTCGGTT--TATTAT--GATAT/A/GGATTACAAAATCGTTATCATTTTGATTTAAAG
yciA ----------------------TTTCTC--TTGATT--------TTCAACAGTGAACCGAT--CAAAAT--AAATA/G/TAATTATTACGATTTGTTAGTGAG---------
yciC ---------------------AAAACCG--TTGACA--------AAAAGGAAAAAAGACCA--TACAAT--TTAAGTC/G/TAACAATTACGTTTTATGATAAATGGCT---
yczA ------------------------AGAA--TTGACT--------TCGTTTCATGAACCGAG--TATTAT--AAACTCT/A/CAAA---------------------------
ydfK ------------------------TCCC--TTGACT------CTCTACTAACTAGAGGGTT--TATTTT--TTATGC/A/GGA-----------------------------
yfkJ --------------------GACATCAG--TTGAAA-------AGAAAATGAACATCCTAC--TAAGAT--ATTCAT/G/AAGGTTT-------------------------
yfmP ----------------------TTAACG--TTTACG--------TTAAGGTTCAAAAGGTG--TATAAT--GGTAAC/A/GAAA----------------------------
yhaG ----------------------AAAGTC--TGGCTA-------TGCAAACCGTCCGTTTGG--TATACT--GTTTGC/A/TAACACATTCTGTAAAGC--------------
yjcI -----------------------AAGTG--TTGAAA--------TAAACTGTGAATTGCGC--TAATAT--AAAACA/A/TCAGAA--------------------------
uxaC ------------------------GAGA--TTGATC--------CCAAAGGAATATAAAGG--TAAAAT--AAAAAC/A/AATCAAAA------------------------
yklA -------------TTTATACGCGAAAAA--TTGACA--------TTTCAAATTTAATTGTG--TACAAT--TTAATT/G/TATAA---------------------------
ykoL ------------------------ATTC--ATACCA--------CGTTCATTTAAAAAGAG--TATCTT--TTGTAT/A/GGAT----------------------------
ykuN -------------------ATTTATCTG--TTGACA-------ATGAAAATCATTATCATT--TAAAGT--GATAC/A/T/A/TG---------------------------
ykvW ------------------------ATAA--TTGAAA---------TTCTCTTCGTGCGTGC--TATAAT--AAAGGA/A/GACAT---------------------------
ylaC ------------------------TTTA--TTGGCC-------ATTTGGATGACGGTGTGG--TTTTAT--TTTTAAT/G/AAGCATAGG----------------------
ylxM -------------------GATAAAAAC--TTGACA--------GTGTCATTAAAACCGTG--TAAACT--AAGTTAT/C/GTAAAGGGATTTGACT---------------
yocH -------------------TTTTTGTTA--TTGATT---------TGACATTTACGTGTGT--TACGAT--ATCACCT/G/TTAG---------------------------
ypuE ---------------------TATTTCA--TTGCGT--------ACTTTAAAAAGGATCGC--TATAAT--AACCAAT/A/AGGACAAA-----------------------
yqxD ------------------------AACA--ATAGCA-------TCTTTGTGAAGTTTGTAT--TATAAT--AAAAAATT/G/TGAT--------------------------
yqxD -----------------------TGGCT--GTGCCA---------AAAGGGAATAATGAAA--AACAAT--AGCATCTTT/G/TGA--------------------------
ytkD ----------------------AAAGGC--TTCCGA---------AGAAACGTAACTGTGG--TATGAT--GTATGG/A/AGAT----------------------------
ytrA ----------------------AAAGGA--TTGACT--------TTGTGAGTCAAAGTATT--TATTGT--ATTAAG/T/GTACT---------------------------
yuxH ------------------TTTTCATGTT--TAGACA-----ATTTTCGTCAAATTATTTGA--TATACT--TAGGGGT/G/AAAGCCGCGCGTATTG---------------
yveK -------------------TTTTGCAAT--TTTTAA--------ATAATAACGTTTTCTTT--TATAAT--CCAATC/A/TTAAC---------------------------
yvgR -----------------------TATAT--TTTACT--------TAAGCCTAGTATTCCGG--TAAAGT--TCAATT/A/GATG----------------------------
ywbI ----------------------TACTTA--TTGTAC-------ATAAGGTCTCTCTATAGG--TAAAAT--ATAT/A/TTAAGAAT--------------------------
ywfK -----------------------CCTTC--TTTACC--------AAGACGGATGATATGAG--TACAAT--AAAGA/A/AAC------------------------------
pyrG -------------------AAAACGATC--TTGACT------------TTCATAGTCGAAC--TATGTA--GTATGTATTTT/G/GGCTCTT--------------------
yqxM ----------------------GGTGTT--TTTAAA-------TCTATAAATCGTTGATTA--TACTCT--ATTTGT/G/AAG-----------------------------
ezrA -------GCACAAAAAGTTTTTGATTTC--TGGTCA------AAAAATGTTTGTTACATGG--TATCAT--AATAAC/A/ATGAAAACGACAGTTTTTC-------------
ezrA -------------AAAATGTTTGTTACA--TGGTAT-----CATAATAACAATGAAAACGA--CAGTTT--TTCTCAAT/A/CATATCCTGAAATCTTTCT-----------
yxeK ------AGAAAAAATTAATCTTAACTCA--TTGACA--------AACGTCCAAGACAAAGG--TACATT--TTGATTT/A/TTCATATT-----------------------
yrrT -----ATAAAATACACAAAGTGTTTTAG--TACCTG--------CTTTTCAGAATATGTGG--TATTAT--AGGAACT/G/TTCCATCAT----------------------
yhcL -----------GTTAAAATAATTCGCAC--TTGACC--------CATCGGAATTAGTGTAA--TATAGT--AAATGAG/A/AAATTTGAAGGG-------------------
ssuB ---------------ATTTAAAAAAGAG--TTGACA-------TATCGGAATAATTTGAAT--TAACAT--GTTA/TT/CAAACAAAAAAAC--------------------
lytE ---------------------GACTAT--TTCTGA------------TGGGAATCTATCCT--TATAAT--AGAAAT/C/AAATAAG-------------------------
sipS ----------------------ACCAAG--CTGAGA--------AACGAACCCAATTAGTA--TGTAAT--CAAAA/T/TAAGTAAA-------------------------
tuaA ----------------------ATACCA--TTTACA-----TCCAATTAACATCCGTCTGC--TAAACT--GACTGG/C/ATAGG---------------------------
ywkA --------------GTAATTTTCTTCTC--TTGAAT--------TTTGATTTTGACAGGCA--TACAAT--AGCTTA/C/GTAATGTAAA----------------------
ykrU --------CCTTCTAAAAAAATCTTGAA--ATGATA-------GTCCATCATCATATATGG--TTAAAT--GAAAA/A/AGTAAAGAAAAATT-------------------
ykrV ------------------CAAATTTTTC--TTTACT--------TTTTTCATTTAACCATA--TATGAT--GATGGACT/A/TCATTTCAAGATTTTTTTAGAA--------
ykrT ----------------TTAAAAAATATA--TTGACA-------ACTAACTAAATTACCTGT--TACCAT--GTTCATC/A/ACTGATAAATTAGAATTGT------------
ykrW --------------TACCCAAAAAAGCA--TTGACA--------AGACCTTATAACGATGG--GATAAT--TCAAAAT/A/ATTTATAAAATCTATATTTTCTTAT------
ykrW -----------GACAAGACCTTATAACG--ATGGGA--------TAATTCAAAATAATTTA--TAAAAT--CTATATT/T/TCTTATCAAG---------------------
ytmI ---------AAGGTTTACTTTTTTTGAT--TAGTCA--------AAGATCAGAGTATGCTT--TATAGT--ATAAAC/AA/TAAAAGCTTAGTAAACAAA------------
ytlI --------AAATATATAATTCCTATTTG--TTTACT---------AAGCTTTTATTGTTTA--TACTAT--AAAGCA/T/ACTCTGATCTTTGACTAAT-------------
ytlI -----------AAATATATAATTCCTAT--TTGTTT--------ACTAAGCTTTTATTGTT--TATACT--ATAAA/G/CATACTCTGATCTTTGACTAAT-----------
speE ------------CAGAACAGGACGCATC--TTTACT--------TTTTCCCCGCCATCCTC--TATACT--TTTTCCTT/A/GGTGAAAATGA-------------------
yflG ---------TTTTCCCAGGTCCGTGTGT--TTCCTA-------TTTTTAAGACAGTTGTGG--TAAGCT--TAATCT/A/GATTATTTAAAAAGAAAGCGGGAATGACAG--
ydfJ ---------CATGCCCGAATGTACGTTT--TTTTCA------------TTTCATTGTCAAC--TACAAT--GAGAAA/G/AATGTGATCAAGC-------------------
abrB ----------------TCTTACAATCAA--TAGTAA----------ACAAAATGATTGACG--ATTATT--GGAAACCTT/G/TTATGCT----------------------
arfM ------AGGCTGTGAAATACATCACTGC--TGTACA------------GGCTCAGTCGAGC--TACACT--AAAGC/TA/TCCTT---------------------------
citG -------------AAACCTTAGTAGAGG--TTATCT------TTTCCTGTTAAAAAAATGA--TATACT--GTGT/TA/GAGTA----------------------------
citG --------------------TTTTCCTG--TTAAAA---------AAATGATATACTGTGT--TAGAGT--ATTTCATG/G/AGTAAG------------------------
cssR ---TCATCCTACATCTTCCTCGCTCTTT--TTCTCT------TCCTTTCTTCCCTTAACCA--TATCAT--AAACAAA/C/ATTGTGGG-----------------------
cssR --------------------TATGAAAA--TTGCCT-----GCCGTATGTTAAAACTAGTT--TATAAT--GACGTT/G/AAAGGATGTG----------------------
des -------------------GTGTGCTAC--TACAAA-------AGACTTCTCTCATTAGCG--TATACT--GAAC/C/GAGA------------------------------
gyrA ------------------AGCAATTTAA--TGTGTA-------TAATCATAAGTTTATTGA--TATAAT--GGAGA/ATAG/TGAAATCGTATTGAA---------------
htrA -----------------TAATCTTTTCA--TTTTTA---------TCCCACAGTTTTTGTT--TATGAT--AAACT/CA/AGTCA---------------------------
ispA -------------------CAAATGGCT--CTGTCC-------GAGCGCTTGCTTTTTTCA--TATAAT--ATGAGGCA/AC/ACCCTTGA---------------------
maeN -------------------TTAAAAAAA--TATGAA----------GTGTTAACGCTTTCT--TGTAGA--CTGT/A/ACAAACAATAC-----------------------
narG --------------AGTGTGTGACATAG--TTCACA----AGGAAACACGCTGTCTCTGTT--TATAGT--GAACT/TA/GCATCACCTGACT-------------------
pckA ---------------------------A--CACACA--------AAAAACAATAAATAGTA--TAGACT--ATTTGAAAATA------------------------------
phoA ------------TTGTTTACATGATCAA--CAGCCG-------CATTTAACAAAGTTTCCC--TAACAT--GATAAAC/G/GAATACATTAAAGGAG---------------
phoB ---------------------AAATCGA--TTAATA-----CTAGCTTAACAGTTTAAAAA--TATAAT--TGGGTT/G/TCA-----------------------------
resA -----------CTTCAAAAAGTAAGAAA--TGTGAA----------ATGAACGTGCAATGA--TATAAT--TGAATGG/A/TCT----------------------------
rpoE -----------ATTAACGCTGTTAAGGG--TAGCAT-------ATTCTGTTTTATTTTGTT--TATAAT--GAGAG/G/T/A/TGGTTTGTA--------------------
sinI -----------ACCATTCGACATCATTC--TCGTTT-------TTTTTGAGAAAATACGAT--TATAAT--AAAGGT/A/TATTGG--------------------------
sinR --------------AGCCAGAAGTCATA--CCGTAA--------ATCCTTTCTGAATGTGC--TATAAT--ATCACA/AG/GAAGGTGAT----------------------
spo0B ------------------GGAAAAACAA--TTGTTT----TTCTAACAAAGCCTTCTCTGT--TATAAT--TCATAAT/A/CACACTTATACAGACT---------------
spoIIGA ------------------TCAACATTAA--TTGACA---GACTTTCCCACAGAGCTTGCTT--TATACT--TATGA/A/GCAAGAAGGGGAACAGCG---------------
yaaA ------------------------CCCT--TTCCCT--------AATTCGTTTTTTTTTAG--TACAAT--TAGATATT/AGTGA/TATTTG--------------------
yaaB ------------TCAAATGACAAAGAAC--TTATAC------GGTGGGACAAAGACTATGC--TAAAAT--AGAG/GGAAG/AGTGATGAAGCAAA----------------
yceC ------------------TCGTCAATTA--TTCTTA-------ACTTTTACGAAACTTTGA--TATAAT--AACAA/A/C--------------------------------
ymaA ----------------CGAATCTATATA--TTGTGT---------TTTTGCTAGAGGGTAG--TATACT--ATATAT/A/GT/G/TTAGT----------------------
yneI ----------------------TCGTAC--TACTAC-------TAATCCTTTTGTTTTTGG--TACAAT--AAGACT/A/TTAT----------------------------
yneJ ----------------------TCAAAA--TGGTTT--------TTTTTATTGTTTTGGAG--TATAGT--ATATAGT/A/TCAA---------------------------
ywcJ -------------------------TAA--TTGTGA---AATACTTCACAATATCGTGCCA--TACTAT--GCTC/A/ATCATGAA--------------------------
fnr -----------------TTAGTTTTTTC--TCGATG------GGTACAAATCAATTCACGT--TACAAT--AAACAC/A/CAACGTGACTTTCTTCG---------------
hmp -------------GATTCATTTTAGATA--TATCTT--------TTATTCGTAAGATCATG--TATTTT--AAAGAT/A/TATTTTAAAT----------------------
narK ---------------ACGTGTGATGTAA--TTCACA----ATCCTGTTTGGCTAGTTTTTG--TATGAT--AAGACT/G/ATTATTG-------------------------
phoD ----------------------CACTTC--TTCACA-----GTCGTTTAACAATGATTTCC--TATAAT--GGAGAC/G/ATCAA---------------------------
spoIIIJ ---------------------GAAAAAG--ACACCA-------TTTAAAACTGAAAGATGC--TAAAAT--ACATACA/A/GTATGCT------------------------
Link to : Weight matrix