SigE alignment

asnO ----------ACAAA---TCAACTA---TCTGCCTATAGATG---CATAAACT---TACTAA/G/GTGC---------
bofA ----------AGTGG---TCTAAAC----TCCTGGATCTTCT---CATAAGCT---TGTACT/A/G------------
cotE -----------TAAG---TAAAGTT---TCTAGGCACCCCTG---CATACAAT---GGAACAG/A/AA----------
cotJA -----------TTAG---TCATAAT---CATGCCTCCTGCCT---CATACCTA---TTAAG/G/TCATT---------
ctaA GCCACAAAACACATA---TTCGCTT---ACACTTGGAACGTA---TATAAAAT---TGC/A/GCAGT-----------
cwlD -----------GTAA---TCATATT---TCCCGACCCTGTCC---CATAGTTA---TGTAAT/A/ACGGACAAG----
cwlJ -----------TCCG---TCATCAC---TTCTGAAGTAATGA---AATATGAT---GAAA/AGA/GATCAAGGG----
dacB -----------TTAT---TCATAAC----TGATGGACATGCG---CATAAACT---TGTA/C/AAACCA---------
gerM -----------TTCG---GTCTATT--TCCTAAAGAGGCTCG---TATACATA---ATAGT/AC/AAACAT-------
glgB -----------CTTC---GAATAAA---TACTATAAATGAAA---ACTATGAT---GTCAGA/AA/GG----------
mmgA -----------TCAT---TCATTCA---TGCCCGTTTCAAAG---CATACATT---CATAGA/A/GAC----------
nucB -----------TTAA---AAATATT---CTTCATCAAGCGCC---CATACATT---GAAATGAACAAA----------
phoB ----------CTAAA---ACTTCTC----ATAAAAGAATAAC---CATTATTT---AA/GG/GTGCCAGTTCAT----
phoP ------AAAATAAAA---TCATGAA---ACATGTTAAGATGA---CATAAAAT---AGAGA/AAT/AGGA--------
prkA -----------CAAA---GCATGTA---TCACGAGATGGCGG---CATAGATT---GTATC/AAAG/TAC--------
safA -------TCCTTTAC---TCATAAC---TTCTTTTGTTCAGG---CATATGTT---GTGAA/G/AAA-----------
spoIID -----------AGAG---TCATATT---AGCTTGTCCCTGCC---CATAGACT---AGACTA/G/AGT----------
spoIIIAA -----------CTTG---TCATAAA----GTCTGCCTCACAT---CATACATT---TTAAAGA/A/GC----------
spoIIIAG ---------AAATAG---AAATACA---AGCTTCCCAGCGCG---CATATATT---CTAGA/A/GAAATGGCTGTCC-
spoIIM -----------AAGG---GCATGTT----TTTCTGTTTCTTT---CATACAAT---CTAT/T/AAATC----------
spoIIP -----------ACAG---TTCTACT---TCCTCTAGCTTGTT---CATAGAGT---AATTACT/A/GAC---------
spoIVA -----------GATG---TCATATT--CAAATAGGACAACGT---CATACACA---TATAGT/G/TCC----------
spoIVA -----------AAAG---GAATGAA----CCTTTCTCCCTTG---CATACAAA---TAGGGA/G/AAA----------
spoIVCA -----AAAATCTCCT---CATTTGG---ACAAACAGCTGTTA---CATAGCAT---TACCC/A/AGGGG---------
spoIVCB ------------ACA---GACACAG--ACAGCCTCCCGGTCA---CATACATT---TA/CATA/TAG-----------
spoIVFA -TTCTTGACTAAACC---GAATATT---TGCCATGGACAAGA---CATATGAT---GTA/CA/AACC-----------
spoVB -----------CTTG---TCATGCT--TGGACGACATATACG---CATATCTT---TATTGTATA-------------
spoVD -----------ATCG---TTCTACC---TGTCCAAATTCAGG---CATAAAAT---GAAA/C/AAGCCT---------
spoVE -----------GGTG---ACATGTT----TATAGATGCCGTG---CATATGCT---TAAGT/AA/GGGC---------
spoVE -----------CTGG---GAATACA---ACATGTCAAACGTG---TCGATAAT---GTTGAAC/AA/GCAGTAT----
spoVID -----------CCAC---TCATATT---TTCTCCAGTTCATA---CATACACC---TTTAGT/G/ACAT---------
spoVK -----------CATG---GTTTGTC--CACCCCATGTCCGTG---AATACAAT---AAGAAA/T/AA-----------
spoVM ------------GAG---GTACTTT--TTCGTTTGCAAAAGG---CATATTAA---TAATGAT/A/AGA---------
spoVR -----------ACTA---TCATCTT---TTGTCTGGCGGGCT---CATACATT---ATAGAT/AA/GT----------
usd -----------TTTA---GCATATT---CCCAAAAGAATGCT---AATACACT---GTTAC/A/AACC----------
yaaH -----------ATAA---ACATGAT---CAGCGCTTTTCTTT---CATACATT---GATAGCG/A/TA----------
yabP ----------CTTGT---TCTAAAA----AAACCCCCCACCT---CATACAAT---GCAGTA/A/TAATG--------
ybaN -----------TCGG---TTATATT---CAATTGTCCATGCT---CATAAGAT---GT/AAAAC/AAGA---------
ycgF -----------TTGT---GCATAGC---TTGGCCCGTTCCCG---AATAAATT---GTAC/AAG/TTACAT-------
ydcA -----------TACG---TACTATT---TAAATGGTTTGTCT---CATAAACG---TGTTACT/AT/AGATA------
ydcC -----------GTCT---GCATATT---AGGGAAACCCCACT---CATATATT---TGATAGT/G/CATTAAGG----
yfhS -----------TAGC---GTATAGT----TCTTTTATTTCCA---CAAACAAT---AATGGC/A/AGAACTTTAA---
yfnE -----------GTGA---AAGCAAG---CGTTATTATTCCTG---CATATAAT---TCGA/AG/GAGC----------
yhaX ----------GTTGT---TCTAAAC----ACAGAGACAGGGT---CATATCCT---ATACAC/AAG/TACAGT-----
yhbH ----------GTTTG---TCAATTA---AACGTGCATATGTG---CATATGAT---GAATAT/AAAT/CT--------
yhcO -----------AATG---ACACACT---GCGAACTCAGGCTG---CATAGAGT---AAAAAT/AAAAAG/GTACA---
yitC -----------TGCG---GAACCAT---TAAGAGCCCGGCTG---AATATGCT---TTTTAGC/AAAAT/GGTTTTAT
yjbX -----------TTTC---TTCTGAT---TTTCAGCTTTCTGT---CATATAGA---TAGAAT/AT/GACACAAT----
yjcA ----CAAGATACAAT---TCATGAA---GAATAGGGTTTTGG---CATATATG---TGAAG/G/GATCA---------
yjmC ----TATAATATAAA---GAATATT---TAAAATAATTTGTA---AATAAAAT---GTGTTT/G/TA-----------
yknT -----------AGAG---GAATAGC----TGTTCAGTATTTG---CATATTGT---AGTGTTAACA/T/CATGA----
ykvI -----------TTCG---TCTTTTC----AAGGAACTTGTCT---CATAGGTT---AT/AAAAAG/GCA---------
ykvU -----------AATA---AAATAAT---TTTTGAACTTGTCT---CATATGAT---GTTGGT/AG/TACAAG------
ylbJ ----------TATGG---TCTAAAC---TGAACCCCTATGCT---CGTATATT---AGTAC/AAAG/AATCA------
yngJ -----------CAGG---GAATGAT---TATAGAACTCGCCT---AATAGGAT---GTTAC/AAAG/ATGTGAA----
yoaW -----------GCCT---GAATATT---TCTTTGAGCTAATG---AATACAAT---AAATCG/A/TAG----------
ypjB -----------GTTG---GTCTATC---CTTGTCCCTTTCTT---CATATTCT---GTAAGG/AG/AGAGAG------
ypqA -----------TTTA---TAACAAC---ATCTGGCATAGACG---CATAATCT---GGTT/AAA/AAAGGCGGT----
yqfC -----------AAAG---TGTTAGA---ACCTCCTTTCAAAT---CATACACA---TGAGATG/A/AAGGGGGTTCT-
yqfZ -----------TTTG---TCATGAA---TCGAAATGGACAAG---CATACTAT---GGTAT/AAAAT/TTCGTAT---
yteV -----------TCTA---TCATAAC---GCTGTTCCAAACGG---AATAGATT---GATA/G/AGAAAG---------
ytrH -----------ATCA---TCATACT---TGTCCTGAAAGCTC---AATATGAT---AT/AAAA/GGTGAGGT------
ytvI -----------GTAT---TCATATT----CAGCCGCAGCGTG---AATACATA---T/AAAAAAT/AGGACAT-----
ytxC ----------TTACG---TCTATTT----TAAAAACATCCCC---CATATACT---TGTAAC/AG/ATGCCG------
yunB -----------CTAT---TACTATG---TCCCCTCTTACAAG---CATACATT---GTGAT/AT/GTAAGGGGG----
yuzC -----------TTTG---TCATATT--CGGCAATTAGGGATC---TATACATA---TAG/AAAC/ATCCTTTTT----
ywdL ----GTTCTTTTTCA---GCATAAT---CCAAGCATCAGCCT---CATAAGGT---GAAAGA/G/ATAAAA-------
yxjC -----------ATCG---GAATAGT---TGGCCCACGCTTCT---CGTACATA---TGG/AAA/GGG-----------
yyaD -----------TATG---GCATGTT---TGCTTTCCTTTATT---TATATAGT---AACAAT/AAC/GGG--------
yybI -----------TATG---TCTTTGA----TGTGCCATTCCTG---CATATAAT---GATTC/AT/TCAGCTG------
Link to : Weight matrix