match_sequences

ComK

We searched for ComK binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for ComK.

Transcription Factor	Regulated gene	organism	position	cis-element	score
ComK	comC	Cgl	-72..-85	`AAAAGAATTTTTT`	`7.202310`
ComK	comC	Eco	-98..-85	`ATAAATAAATTTT`	`5.941580`
ComK	comC	Cje	-124..-137	`AAAAAAGGTTTTT`	`7.202310`
ComK	comC	Mlo	-121..-134	`AAATATCGTTTTT`	`5.617340`
ComK	comC	Syn	-191..-178	`AAATTGGGCTTTT`	`5.617340`
ComK	thdF	Bsu	-278..-291	`AAATCCAATTTTT`	`5.617340`
ComK	thdF	Lla	-110..-123	`AAAAATAAATTTT`	`7.202310`
ComK	thdF	Spy	-107..-120	`AAAATCATTTTTT`	`7.202310`
ComK	thdF	Lin	-269..-256	`AAATTTAAGTTTT`	`5.617340`
ComK	thdF	Mpu	-65..-52	`AAATAAAACTTTT`	`5.617340`
ComK	thdF	Cpn	-119..-132	`ATAATTTCTTTTT`	`5.941580`
ComK	thdF	Dra	-70..-57	`AAAATGAAATTTC`	`5.929870`
ComK	yyaF	Bsu	-94..-107	`AAAAAGCATTTTC`	`5.929870`
ComK	yyaF	Lin	-46..-59	`AAATAGACATTTT`	`5.617340`
ComK	yyaF	Mge	-56..-43	`AAATTGCGCTTTT`	`5.617340`
ComK	yyaF	Cje	-130..-143	`AAAATAAAATTTC`	`5.929870`
ComK	yyaF	Mlo	-31..-18	`AAATTTCGCTTTT`	`5.617340`
ComK	yneA	Bsu	-139..-152	`AAAAAAAGTTTTT`	`7.202310`
ComK	yneA	Bha	-274..-261	`AAAATCACCTTTC`	`5.929870`
ComK	yneA	Cac	-135..-122	`ATAATAAATTTTT`	`5.941580`
ComK	yneA	Lla	-133..-146	`ATAAATTTTTTTT`	`5.941580`
ComK	yneA	Pmu	-75..-88	`AAAAGCAAATTTT`	`7.202310`
ComK	addB	Bsu	-111..-98	`ATAATCAGCTTTT`	`5.941580`
ComK	addB	Cac	-54..-67	`AAATAATTGTTTT`	`5.617340`
ComK	addB	Lla	-50..-37	`AAATTTAGATTTT`	`5.617340`
ComK	comK	Bsu	-134..-147	`ATAAACCGATTTT`	`5.941580`
ComK	ywpH	Cac	-81..-94	`ATAATACAATTTT`	`5.941580`
ComK	ywpH	Lin	-153..-166	`AAAACACTATTTT`	`7.202310`
ComK	ywpH	Hin	-130..-117	`AAATGTAAATTTT`	`5.617340`
ComK	ywpH	Mlo	-34..-21	`AAAAATTTGTTTC`	`5.929870`
ComK	ywpH	Syn	-135..-148	`AAATTACTATTTT`	`5.617340`
ComK	yvrP	Bsu	-114..-127	`AAAATTGTATTTT`	`7.202310`
ComK	yvrP	Bha	-127..-114	`ATAAGTATATTTT`	`5.941580`
ComK	yvrP	Spy	-188..-201	`AAATGATTTTTTT`	`5.617340`
ComK	yvrP	Eco	-32..-19	`ATAACGCGCTTTT`	`5.941580`
ComK	yvrP	EcZ	-32..-19	`ATAACGCGCTTTT`	`5.941580`
ComK	yvrP	Ecs	-78..-91	`AAATTGTCATTTT`	`5.617340`
ComK	yvrP	Ype	-112..-99	`AAATGAGATTTTT`	`5.617340`
ComK	yvrP	Pae	-132..-119	`AAATTGAATTTTT`	`5.617340`
ComK	yvrP	Xfa	-46..-59	`AAATAACCATTTT`	`5.617340`
ComK	yvrP	Nme	-107..-94	`AAATGGTTATTTT`	`5.617340`
ComK	yvrP	NmA	-107..-94	`AAATGGTTATTTT`	`5.617340`
ComK	yvrP	Hpy	-66..-53	`AAATATTCATTTT`	`5.617340`
ComK	yvrP	jHp	-69..-56	`AAATATTCATTTT`	`5.617340`
ComK	yvrP	Cje	-81..-94	`ATAAAATTATTTT`	`5.941580`
ComK	yvrP	Atu	-56..-43	`ATAAAAGAATTTT`	`5.941580`
ComK	yvrP	Bme	-180..-193	`AAAACCCCATTTT`	`7.202310`
ComK	yvrP	Mlo	-57..-44	`AAAATCAGGTTTC`	`5.929870`
ComK	yvrP	Rco	-160..-147	`AAAAAGCTGTTTC`	`5.929870`
ComK	yvrP	Nos	-236..-249	`AAATCTATTTTTT`	`5.617340`
ComK	yvrP	Fnu	-93..-106	`AAATTTTAATTTT`	`5.617340`
ComK	yhjB	Bsu	-277..-290	`AAAATGATTTTTT`	`7.202310`
ComK	yhjB	Sau	-54..-41	`ATAAATTTATTTT`	`5.941580`
ComK	yhjB	Eco	-24..-11	`ATAATAATTTTTT`	`5.941580`
ComK	yhjB	EcZ	-24..-11	`ATAATAATTTTTT`	`5.941580`
ComK	yhjB	Ecs	-24..-11	`ATAATAATTTTTT`	`5.941580`
ComK	yhjB	Pmu	-32..-19	`AAATCATACTTTT`	`5.617340`
ComK	yhjB	Rpr	-256..-269	`ATAAATAAATTTT`	`5.941580`
ComK	yhjB	Rco	-170..-183	`AAAAGATTTTTTT`	`7.202310`
ComK	yhjB	Cpn	-250..-263	`AAAAATTATTTTT`	`7.202310`
ComK	yhjB	Syn	-100..-113	`AAAAGTCTGTTTT`	`7.202310`
ComK	yhjB	Fnu	-140..-127	`ATAAAAATGTTTT`	`5.941580`
ComK	ybdK	Bsu	-78..-65	`ATAAAGGAATTTT`	`5.941580`
ComK	ybdK	Bha	-209..-222	`ATAATCAAGTTTT`	`5.941580`
ComK	ybdK	Cac	-58..-71	`AAAACTTAATTTT`	`7.202310`
ComK	ybdK	Spn	-42..-55	`ATAACACTATTTT`	`5.941580`
ComK	ybdK	Sau	-96..-109	`AAATTACATTTTT`	`5.617340`
ComK	ybdK	Lin	-58..-71	`AAATTATTTTTTT`	`5.617340`
ComK	ybdK	Eco	-161..-148	`ATAATAGCATTTT`	`5.941580`
ComK	ybdK	EcZ	-161..-148	`ATAATAGCATTTT`	`5.941580`
ComK	ybdK	Ecs	-68..-81	`AAATTTTATTTTT`	`5.617340`
ComK	ybdK	Sty	-264..-251	`AAATAATCGTTTT`	`5.617340`
ComK	ybdK	Rso	-114..-127	`AAAACTCTTTTTT`	`7.202310`
ComK	ybdK	Bme	-171..-184	`AAAAAGCCTTTTC`	`5.929870`
ComK	ybdK	Mlo	-15..-2	`AAATTGAAGTTTT`	`5.617340`
ComK	ybdK	Bbu	-21..-8	`ATAAGGGAATTTT`	`5.941580`
ComK	ybdK	Syn	-188..-175	`AAAATGGAATTTC`	`5.929870`
ComK	ybdK	Nos	-60..-73	`AAATGTAATTTTT`	`5.617340`
ComK	ybdK	Aae	-3..-16	`AAAAATTTCTTTC`	`5.929870`
ComK	ybdK	Tma	-271..-284	`ATAACAGACTTTT`	`5.941580`
ComK	ybdK	Fnu	-52..-65	`AAATTAATATTTT`	`5.617340`
ComK	rapH	Bsu	-32..-19	`ATAAACAGTTTTT`	`5.941580`
ComK	rapH	Bha	-113..-126	`AAAACGTAATTTC`	`5.929870`
ComK	rapH	Cac	-111..-98	`AAAAGCTTATTTC`	`5.929870`
ComK	rapH	Spy	-159..-146	`AAATTGATGTTTT`	`5.617340`
ComK	rapH	Sau	-74..-61	`AAAATAAATTTTC`	`5.929870`
ComK	rapH	Lin	-35..-22	`AAATAAAGCTTTT`	`5.617340`
ComK	rapH	Eco	-223..-210	`AAATCATTATTTT`	`5.617340`
ComK	rapH	EcZ	-211..-224	`AAATAATATTTTT`	`5.617340`
ComK	rapH	Ecs	-211..-224	`AAATAATATTTTT`	`5.617340`
ComK	rapH	Ype	-190..-177	`AAATATCTCTTTT`	`5.617340`
ComK	rapH	Pmu	-190..-177	`AAAATGACATTTC`	`5.929870`
ComK	rapH	Hpy	-130..-143	`AAAACGATATTTT`	`7.202310`
ComK	rapH	Cje	-12..-25	`AAATTATATTTTT`	`5.617340`
ComK	rapH	Rpr	-77..-64	`ATAAAATTATTTT`	`5.941580`
ComK	rapH	Rco	-63..-76	`AAATAATAATTTT`	`5.617340`
ComK	rapH	Ctr	-83..-96	`ATAAAAACGTTTT`	`5.941580`
ComK	rapH	Cpn	-96..-109	`AAAACCTTCTTTT`	`7.202310`
ComK	rapH	Tpa	-51..-38	`AAAAAGTACTTTC`	`5.929870`
ComK	rapH	Bbu	-166..-179	`ATAATTGATTTTT`	`5.941580`
ComK	rapH	Syn	-191..-178	`AAATATTCTTTTT`	`5.617340`
ComK	rapH	Nos	-255..-268	`AAAAGGCTTTTTT`	`7.202310`
ComK	rapH	Fnu	-155..-168	`ATAAAAAATTTTT`	`5.941580`
ComK	yhcH	Bsu	-101..-114	`AAAAGGCCTTTTC`	`5.929870`
ComK	yhcH	Bha	-81..-94	`ATAAGTACATTTT`	`5.941580`
ComK	yhcH	Cac	-239..-252	`AAATAAGGCTTTT`	`5.617340`
ComK	yhcH	Lla	-77..-90	`ATAAGAGTTTTTT`	`5.941580`
ComK	yhcH	Spy	-100..-113	`AAATAAGAATTTT`	`5.617340`
ComK	yhcH	Spn	-187..-200	`AAATTGAAATTTT`	`5.617340`
ComK	yhcH	Lin	-131..-144	`AAAATTTCTTTTC`	`5.929870`
ComK	yhcH	Hpy	-237..-224	`AAAACCCCGTTTC`	`5.929870`
ComK	yhcH	jHp	-243..-230	`AAAAACCCGTTTC`	`5.929870`
ComK	comEA	Cac	-135..-148	`ATAACAGTTTTTT`	`5.941580`
ComK	comEA	Spn	-48..-61	`AAAATTTCTTTTC`	`5.929870`
ComK	comEA	Pmu	-137..-124	`ATAATTTTCTTTT`	`5.941580`
ComK	comEA	Cje	-30..-17	`ATAATTATTTTTT`	`5.941580`
ComK	smf	Cac	-89..-76	`ATAAAAACCTTTT`	`5.941580`
ComK	smf	Lin	-106..-119	`AAAATACGCTTTT`	`7.202310`
ComK	smf	Mpu	-60..-47	`AAATTTATTTTTT`	`5.617340`
ComK	smf	Hin	-87..-100	`AAAAATTCTTTTT`	`7.202310`
ComK	smf	jHp	-196..-209	`AAAAGCTAATTTT`	`7.202310`
ComK	smf	Rco	-240..-253	`ATAACCTTCTTTT`	`5.941580`
ComK	smf	Fnu	-188..-201	`AAAAGATTTTTTT`	`7.202310`
ComK	cspB	Cac	-165..-178	`AAATCAACTTTTT`	`5.617340`
ComK	cspB	Lla	-76..-89	`AAAATCTACTTTC`	`5.929870`
ComK	cspB	Cgl	-261..-248	`AAATACCCCTTTT`	`5.617340`
ComK	cspB	EcZ	-115..-102	`ATAACGCGATTTT`	`5.941580`
ComK	cspB	Ecs	-115..-102	`ATAACGCGATTTT`	`5.941580`
ComK	cspB	Ype	-145..-158	`AAAACCACCTTTT`	`7.202310`
ComK	cspB	Vch	-12..-25	`AAAAACATTTTTT`	`7.202310`
ComK	cspB	Pae	-216..-203	`AAAAGCGCGTTTC`	`5.929870`
ComK	cspB	Pmu	-248..-235	`ATAAACACTTTTT`	`5.941580`
ComK	cspB	Rco	-117..-104	`ATAATGAATTTTT`	`5.941580`
ComK	cspB	Tma	-188..-175	`AAAAAACTCTTTC`	`5.929870`
ComK	sbcD	Ype	-152..-139	`AAATGTTATTTTT`	`5.617340`
ComK	comGA	Bsu	-115..-128	`AAAAAAGACTTTC`	`5.929870`
ComK	comGA	Cac	-116..-103	`AAATGTAAGTTTT`	`5.617340`
ComK	comGA	Lla	-99..-112	`ATAAGAGTATTTT`	`5.941580`
ComK	comGA	Spn	-60..-73	`AAAAGTTACTTTT`	`7.202310`
ComK	comGA	Sau	-36..-49	`AAAAGCAATTTTT`	`7.202310`
ComK	comGA	Mpu	-258..-271	`AAAAAGTGCTTTC`	`5.929870`
ComK	comGA	Uur	-97..-110	`AAAAGCCTCTTTT`	`7.202310`
ComK	comGA	Nos	-32..-19	`AAATAGAGGTTTT`	`5.617340`
ComK	comFA	Bsu	-101..-88	`AAATCTCCGTTTT`	`5.617340`
ComK	comFA	Bha	-3..-16	`AAATCCTCCTTTT`	`5.617340`
ComK	comFA	Mpu	-39..-26	`AAATAAAAGTTTT`	`5.617340`
ComK	comFA	Rco	-64..-77	`AAAACTTATTTTT`	`7.202310`
ComK	recA	Bsu	-146..-133	`AAAACATGATTTC`	`5.929870`
ComK	recA	Sau	-70..-83	`AAATGCTACTTTT`	`5.617340`
ComK	recA	Mge	-88..-101	`AAAATCTCTTTTT`	`7.202310`
ComK	recA	Hin	-181..-194	`AAAAATAAATTTT`	`7.202310`
ComK	recA	Rpr	-172..-185	`AAAAGATAGTTTT`	`7.202310`
ComK	recA	Rco	-203..-190	`AAATCTATCTTTT`	`5.617340`
ComK	recA	Nos	-248..-235	`ATAATTTATTTTT`	`5.941580`
ComK	recA	Fnu	-143..-130	`AAATACATTTTTT`	`5.617340`
ComK	yneB	Cac	-162..-175	`ATAATCATATTTT`	`5.941580`