SigE

We searched for SigE binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigE.

Transcription Factor Regulated gene organism position cis-element score
SigE ybaN Bsu -69..-40 TTATATTCAATTGTCCATGCTCATAAGAT 7.723090
SigE ybaN Bha -139..-111 TCCTACCTATAATTAACTCACATACAAT 9.040350
SigE ybaN Cac -60..-32 TCATATATTTTTTTTTAAGGAATAAATT 7.312560
SigE spoIVCA Bsu -145..-117 CCATGTTCAAGAAGGTTTTTCATAAAAT 7.294080
SigE spoIVCA Cac -15..-45 TTATAAAAAATCATAGAGTAGTCATATAAT 7.798350
SigE spoIVCA Eco -203..-232 TCATATAAATATAAGAGCCTCCATATTTT 8.124240
SigE prkA Bsu -82..-53 GCATGTATCACGAGATGGCGGCATAGATT 8.913760
SigE prkA Cac -96..-68 TAATTTTACAATAATAAATACATATATT 7.829290
SigE ydcC Bsu -57..-28 GCATATTAGGGAAACCCCACTCATATATT 10.559730
SigE ydcC Bha -183..-154 GCATATTGCCCCAGTTTGTCTCATATAGA 8.399110
SigE ydcC Spn -130..-160 AAATAATCTTCTTCTAGTTTCGCATAAAAT 7.293340
SigE ydcC Bbu -109..-139 TATTAATAGTACTAGTTTAATACATAAAAT 7.301810
SigE spoIVFA Bsu -62..-33 GAATATTTGCCATGGACAAGACATATGAT 8.893440
SigE spoIVFA Bha -89..-60 TCATAATATGGAGCATGTGTCCATAGGAT 9.379370
SigE spoIVFA Rpr -211..-240 GAATAATATGTTCTAAAACATCATAAATA 7.194370
SigE spoIVFA Bbu -38..-68 GATTATTCTTTACTAACTTCACCATAGATT 7.718630
SigE spoIVFA Fnu -149..-177 TCATAATTTAACCCCATTCTCAGATATT 7.498290
SigE ykvI Sty -51..-79 TCATAATGTATTATTATTTTTATATGAT 7.222940
SigE spoVD Bsu -72..-101 TCAAATCATTCAATATATTTACATATACT 8.700670
SigE spoVD Xfa -190..-161 GCATGGTGATTTCGTATGATCCATACATG 7.520120
SigE spoVD Tpa -66..-37 TCCTGTTTTGCGGGTTGATTGCATAAATT 8.447320
SigE spoVD Bbu -50..-21 TAATTTTTTATTTCATATAGTCATAAAAT 7.334170
SigE ytvI Bsu -67..-39 TCATATTCAGCCGCAGCGTGAATACATA 7.689260
SigE ytvI Lin -101..-71 ACATATATTTTTAAGTCAACATCATAAATT 7.849600
SigE ytvI Sty -42..-14 GCATAAAAAAGCAATAAAGGCATATAAC 6.994290
SigE ytvI Rco -38..-66 TCACAAGGCGAAGATCACAGCATATACT 7.351620
SigE mmgA Bsu -85..-56 TCATTCATGCCCGTTTCAAAGCATACATT 8.006830
SigE mmgA Sau -198..-168 ACATATTAATATATGCAAATTGCATATAAA 7.744680
SigE mmgA Sty -70..-99 GCATAAAAATATGAATTCGTGAATACGAT 7.663260
SigE mmgA Bbu -14..-42 TCTTAATAAACTTATTGAATTATACAAT 6.971210
SigE phoB Ype -5..-35 TAATTCCTTGTTGTAAAACAGTCATACAAT 7.395610
SigE ylbJ Bsu -115..-144 GCATAGGGGTTCAGTTTAGACCATAGAAT 8.032410
SigE yhaX Bha -148..-177 TCATGTCGGTGGTACGATTTCCATAGATT 9.352610
SigE yhaX Cac -90..-61 TTATAACATATCCATAAAGTTCATACATT 8.775250
SigE yhaX Spy -78..-50 TCCTATCTTTTTTACTAATGAATACGCT 7.352650
SigE yhaX Sau -220..-250 TAATATCTTAGCTTTTCTAATTCATAGACA 7.330580
SigE yhaX Lin -173..-202 TCGTGAAATACTACTTTACTCCATACAAT 7.088570
SigE yhaX Sty -180..-152 AAATAAAAGAGTAGTCAGAACATACACT 7.607050
SigE yhaX Bbu -43..-73 TCTTAATAAATTATTCTTAAAGCATAAAAT 8.445120
SigE yhaX Nos -30..-60 CCATAATACAGCAATGTACAAGCATAAATT 7.518940
SigE yxjC Pmu -250..-220 TCATGATCTTTCCTTTTCTTCGCATAAAAG 7.028870
SigE yngJ Bha -83..-55 TCTTTTCTTCATTGTGCGATCATACATT 7.873010
SigE yngJ Sau -21..-49 TTCTATTGCTCTAAATATATCATAAACT 7.300310
SigE yngJ MtC -13..-42 TCATGGTCTAGCAGCCAGCCGCATACGCT 9.238830
SigE yaaH Bsu -69..-40 ACATGATCAGCGCTTTTCTTTCATACATT 8.955420
SigE yaaH Bha -84..-55 TCATGAACAGTTCCATTGTCGCATAAATT 8.460130
SigE yaaH Cac -28..-58 TAATACTTCTATATCGAATAAAAATACAAT 7.338920
SigE cwlD Bsu -154..-183 ACATGAAATCTGTGCATACGCCATATGTT 7.093850
SigE cwlD Nos -97..-69 GTATATCTATTCCCACTCCCCATATAAT 8.583170
SigE spoIID Bsu -66..-37 TCATATTAGCTTGTCCCTGCCCATAGACT 10.218970
SigE spoIID Bha -74..-46 TCTAGACAAGCCCAAGCCTTCATACAAT 7.114560
SigE spoIVCB Bsu -108..-136 TAAAATCAAGGGGTTCTAACCATAAAAT 6.978730
SigE spoIVCB Cac -120..-150 TCATATTCTTAATTTATTTTATAATACTAT 7.587370
SigE spoVK Bha -60..-90 GCTTGTCCTGCTCTCTCACCGACATATAGT 7.743320
SigE yyaD Sty -51..-79 TCATAATGTATTATTATTTTTATATGAT 7.222940
SigE gerM Sau -36..-66 TCATTTTAATCAATGAGACTAAAATACGCT 7.139290
SigE cwlJ Bsu -34..-63 TCATAACCTTAACAAGAGATCCATTCATT 7.527320
SigE dacB Bsu -59..-31 TCATAACTGATGGACATGCGCATAAACT 9.533700
SigE dacB Bha -64..-36 TCATACCAATCCTTGCGGTGCATACACT 10.116320
SigE dacB Cac -197..-169 TTATATTACAGCTTAATTCTCATATATA 7.320990
SigE dacB Lla -192..-221 TCAGAACTTGGCTTAAGCGACCATATACT 7.497030
SigE dacB Lin -93..-123 TCATTTTTTTGACGGATACTTTCATATTTT 7.376890
SigE dacB Ype -177..-205 ACATCTTGCCGTTGGCCTTACATAAGTT 6.978590
SigE ycgF Bsu -63..-34 GCATAGCTTGGCCCGTTCCCGAATAAATT 7.052430
SigE ycgF Bha -161..-190 GATTATCAATCAATTTTCACCCATATGTT 7.238610
SigE yjmC Bsu -90..-61 GAATATTTAAAATAATTTGTAAATAAAAT 7.045840
SigE yjmC Eco -43..-15 GCATAAAAATACAACAAACACATAACAT 7.454430
SigE yjmC EcZ -43..-15 GCATAAAAAAACAACAAACACATAACAT 7.454430
SigE yjmC Ecs -43..-15 GCATAAAAAAACAACAAACACATAACAT 7.454430
SigE ydcA Spy -145..-173 TCATCATCTTCTTATCATACCATAAATT 8.643690
SigE ydcA Cje -33..-61 TAAAATTCACATAAAATTCACATAAATT 7.229990
SigE ydhD Bsu -69..-40 ACATGATCAGCGCTTTTCTTTCATACATT 8.955420
SigE ydhD Bha -84..-55 TCATGAACAGTTCCATTGTCGCATAAATT 8.460130
SigE ydhD Cac -28..-58 TAATACTTCTATATCGAATAAAAATACAAT 7.338920
SigE spoVR Bha -58..-29 TCATCATTAGGGAAGATGATTCATAAAAT 8.680500
SigE yhbH Pmu -119..-91 GCATGTAATCAAAAATGCATCATAACAT 7.192760
SigE ykvU Bsu -74..-44 TCATGCTTGGACGACATATACGCATATCTT 7.713950
SigE ykvU Bha -94..-122 TCACGTTCACCTATAAGTCCCATATACT 8.474400
SigE ykvU Cac -223..-253 TTATGCTCTATTTTGCTTTTTTCATACATT 8.100800
SigE ykvU Spn -184..-155 TCTAATTCATTATTGAGAACTCATATATT 7.575280
SigE ykvU Hin -46..-74 GCTTATTTTAACAAAATCAACATAGACA 7.488440
SigE spoIIIAA Bsu -64..-36 TCATAAAGTCTGCCTCACATCATACATT 10.005270
SigE spoIIM Bsu -68..-40 GCATGTTTTTCTGTTTCTTTCATACAAT 10.620190
SigE spoIIM Bha -46..-74 TCATACAATCTATATATTACCATAAAGT 7.783560
SigE spoIIM Cac -63..-34 GCATAAACCTTTTCTATATATCATATTAT 7.984370
SigE spoVE Bha -84..-55 ACATGTTCGGTTTGTCTGGTGCATACAGT 8.484920
SigE spoVE Cac -55..-83 TCATATTAGAGTTCTATATGCAAATAAT 7.580930
SigE spoVE Lla -120..-150 TAATATCATAAATCCATTCTATTATACAAT 7.102890
SigE spoVE Spn 0..-28 ATATACTAACCTTATACTTTCATACAAT 7.293970
SigE spoVE Xfa -190..-161 GCATGGTGATTTCGTATGATCCATACATG 7.520120
SigE spoVE Tpa -66..-37 TCCTGTTTTGCGGGTTGATTGCATAAATT 8.447320
SigE spoVB Bsu -74..-44 TCATGCTTGGACGACATATACGCATATCTT 7.713950
SigE spoVB Bha -94..-122 TCACGTTCACCTATAAGTCCCATATACT 8.474400
SigE spoVB Cac -223..-253 TTATGCTCTATTTTGCTTTTTTCATACATT 8.100800
SigE spoVB Spn -184..-155 TCTAATTCATTATTGAGAACTCATATATT 7.575280
SigE spoVB Hin -46..-74 GCTTATTTTAACAAAATCAACATAGACA 7.488440