SigW

We searched for SigW binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigW.

Transcription Factor Regulated gene organism position cis-element score
SigW yxjI Bsu -62..-34 TGAAACCTTTTCGCCACCTATCCGTAAT 14.029370
SigW yxjI Eco -53..-82 TGAAACCTTTGCAAAGTCTGGAATCTGTA 6.773240
SigW yxjI Ype -5..-33 TAAAACCTCTTCCTTAATAAGCCTTATA 8.358730
SigW ybfO Bsu -63..-34 GGAAACTTTTTCTATATCTATCTCGTAAT 12.154120
SigW ydbS Bsu -60..-32 TGAAACCTTTCTGTAAAAGAGACGTATA 16.386640
SigW sigW Bsu -83..-54 GCAAACTATTTTTCAGCCTGCCGCGTCTA 8.831840
SigW sigW Bha -61..-32 GGAAAATCGTGCTATATAATGTTCGTATA 7.686980
SigW sigW Cac -63..-35 TGAAACTTTTTTTATGTAAATGTGTATT 11.927730
SigW sigW Lin -55..-26 CCAAACCTAAATGATACTTGCTTCGTCTA 7.080750
SigW sigW Pae -100..-129 GGTGACATGTTTTCACCGATTGCCGTATA 7.119550
SigW sigW Pmu -92..-64 TTGAACTTTTTTTATTCGGCACCGTCTA 9.906130
SigW sigW Rso -88..-117 TGCATCCGTTTCGGCGCGCTCTTCGTATA 9.073110
SigW sigW Bme -14..-43 TGTAACCTTTTTCCCCTATCCAGCGAAAC 7.356890
SigW sigW Mlo -128..-100 GGGAACCTTTTGTCGGCACGAACATCCA 7.143210
SigW sigW Ccr -52..-24 TGGAACCTTCGCCGCTGCGGGCCGTTGT 7.206910
SigW sigW Syn -108..-80 TGAACCTTGGGTAAACCCGTGGGGTCTA 6.800190
SigW yfhL Bsu -49..-21 TGAAACATTTCTTCTTTCTGCACGTAAC 11.479430
SigW yfhL Mle -125..-96 GGGAACTTTTTGCGCGCTTTCGCCGACCA 7.241090
SigW ywbN Ype -51..-79 TGAAACGATTAAAATTACCTTGCGACAA 7.850210
SigW ywaC Bsu -72..-44 AGAACCTTGCAGCAGACAGGGACGTCTA 6.996040
SigW ywaC Cac -220..-249 TAAAACTTTAACACAAAATGAAACATATA 8.248240
SigW ythP Bsu -50..-22 AGAAACTTTTTTTATTCTATTTCGTAGT 11.340600
SigW ythP Bha -44..-15 TGAACCTTTTGGAGTTAATATCCAGTAAA 8.491570
SigW ythP Cac -84..-55 TGACACTTTTTCTTTACTAGTGTATTATA 6.801430
SigW ythP Cgl -264..-293 TGAAACGTTTTCTGAATTGAGTACGCGAA 7.447410
SigW ythP Ccr -103..-75 GGCGACCTTTATAGCCGGGCCTCGTCCA 7.711330
SigW ythP Syn -6..-35 TGCAACTTTTCTTAACATTATCCCTGATA 7.275940
SigW ythP Tma -187..-215 TGAAACTTTGGGAAGAGGAGGGAGAACA 7.447660
SigW abh Bsu -97..-68 GGAAACTTTTTCAAAGTTTCATTCGTCTA 14.091630
SigW abh Cac -144..-173 TGAAATTTATTGTAGCTTTTTATCGAATA 7.471430
SigW abh Bsu -97..-68 GGAAACTTTTTCAAAGTTTCATTCGTCTA 14.091630
SigW abh Cac -144..-173 TGAAATTTATTGTAGCTTTTTATCGAATA 7.471430
SigW yndN Bsu -63..-34 TGAAACTTTCTTATGAAAAAAGTCGTATA 13.901840
SigW yndN Pae -51..-80 TGAGCCGTTTCGACAGGTTTCTGCGTCGA 6.866700
SigW yndN Nos -65..-94 TCAAACATTTATACCCCTACACCCCTATA 8.195150
SigW yceC Bsu -114..-85 CGAAACTTTGATATAATAACAAACGTATA 13.084800
SigW pbpE Bsu -48..-20 TGAAACGTTAGTAGGTTAGTAACGTACA 11.432520
SigW pbpE Bha -22..-50 TGAAATTTTTAACTTTTCTCCTCCTAAA 7.162110
SigW pbpE Mtu -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.239210
SigW pbpE MtC -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.239210
SigW pbpE Ype -79..-107 TGAATAATTTACATTACAAGGACGTATT 8.070170
SigW pbpE Ccr -20..-49 GGAAACTTCTAGGGTTTGTGTAGCGTGCT 7.504310
SigW pbpE Nos -65..-37 TGAAGCGGGTCGTTGGGCGCTTCGTACA 6.894590
SigW yjoB Bsu -63..-35 TGAAACAAAATGCTATGTCAATCGTATA 9.498360
SigW yjoB Mtu -62..-34 GGTAACCTGGACTTTCCAGCTGCGTGTA 7.516880
SigW yjoB MtC -62..-34 GGTAACCTGGACTTTCCAGCTGCGTGTA 7.516880
SigW yqeZ Bsu -73..-44 TGAAACCTTTGATACATTTGTTACGTATG 14.541630
SigW yqeZ Bha -63..-35 TGAAACTTATTTCTACACATTTCGTAAA 12.150340
SigW xpaC Bsu -75..-47 TGAAACTTGTTTAAGGATTGAACGTAGT 12.508230
SigW yrhH Bsu -121..-92 TGAAACATTTTTCAATACATTGCCGTCTA 14.686590
SigW yrhH Bha -140..-112 TGAAAACTCTAAGCTTTTTTACCGAATT 7.272350
SigW yrhH Cgl -69..-41 TAAAACTAGTAGAACAGAGGAGCGTGTT 7.220490
SigW yrhH Eco -9..-37 TGAAACCTCTATTACGTCAACCCTTCCG 6.861300
SigW yrhH EcZ -60..-88 CAACACCTTTATAGCAAACTGGCGTAGA 7.606640
SigW yrhH Ecs -60..-88 CAACACCTTTATAGCAAACTGGCGTAGA 7.606640
SigW yrhH Pae -69..-98 CGAATCCTGTCGATACGGAAACACGACTT 6.575390
SigW yrhH Nme -139..-111 TGGTACTGTTTGACTGAAAAAGCGTCAA 6.888540
SigW yrhH NmA -139..-111 TGGTACTGTTTGACTGAAAAAGCGTCAA 6.888540
SigW yrhH Syn -167..-138 AGAAACTATTTTTAAAGCGATTTCTTCTA 7.829080
SigW pbpX Bsu -48..-20 TGAAACGTTAGTAGGTTAGTAACGTACA 11.432520
SigW pbpX Bha -22..-50 TGAAATTTTTAACTTTTCTCCTCCTAAA 7.162110
SigW pbpX Mtu -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.239210
SigW pbpX MtC -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.239210
SigW pbpX Ype -79..-107 TGAATAATTTACATTACAAGGACGTATT 8.070170
SigW pbpX Ccr -20..-49 GGAAACTTCTAGGGTTTGTGTAGCGTGCT 7.504310
SigW pbpX Nos -65..-37 TGAAGCGGGTCGTTGGGCGCTTCGTACA 6.894590