SigX

We searched for SigX binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigX.

Transcription Factor Regulated gene organism position cis-element score
SigX abh Bsu -97..-68 GGAAACTTTTTCAAAGTTTCATTCGTCTA 11.839940
SigX abh Bha -68..-97 TGTAACAAATGGCACAAGAAAGCTGTCTT 8.190020
SigX abh Bsu -97..-68 GGAAACTTTTTCAAAGTTTCATTCGTCTA 11.839940
SigX abh Bha -68..-97 TGTAACAAATGGCACAAGAAAGCTGTCTT 8.190020
SigX csbB Bsu -114..-86 TGTAACAAAAAACAGGTTTAAACGACTT 10.090830
SigX csbB Uur -76..-47 TAAAACTAGAGCATTTTATTTTGCTTCTA 7.674680
SigX csbB Ecs -85..-56 TGAAACGCTGCAATGGCAGGAGTGGTCAC 7.488340
SigX csbB Ype -55..-83 TGCGACTCTAACTCAATTCGCACGACTA 7.903140
SigX csbB Nme -127..-155 TCTAACCCCTGAGCTACAGACCCGTCAA 8.472510
SigX csbB Mlo -124..-96 TGAAACGGTGTAACCTGCCGTCCGGCAC 8.156000
SigX csbB Nos -157..-128 TATAACTAAATATATATAAAACTCGACTT 8.084430
SigX ywbN Mle -124..-96 TGCCACAGCTAATCGATTCGGTCGTCTC 7.633410
SigX ywbN Ecs -294..-265 AAAAACAACGTTCTTTTGTGAAACGACTA 7.940700
SigX ywbN Ype -51..-79 TGAAACGATTAAAATTACCTTGCGACAA 10.798600
SigX ywbN Nme -213..-241 TAAAACTTCAGACGGTATCTGCCGCCAA 7.559050
SigX ywbN NmA -213..-241 TAAAACTTCAGACGGCATCTGCCGCCAA 7.559050
SigX sigX Bsu -83..-54 GCAAACTATTTTTCAGCCTGCCGCGTCTA 8.869850
SigX sigX Bha -61..-33 TGAAACATCTTAAACGTTCATTCGTATA 9.681080
SigX sigX Lin -55..-26 CCAAACCTAAATGATACTTGCTTCGTCTA 8.407870
SigX sigX Pae -114..-86 GAAAACATGTCACCGCAGGTACCGTCAC 7.575000
SigX sigX Pmu -92..-64 TTGAACTTTTTTTATTCGGCACCGTCTA 7.701540
SigX sigX Atu -79..-50 CGAAACGCCGCGACGGATTTTCGCGCCTT 7.943950
SigX sigX Mlo -33..-4 CGCATCTTTTGGCTTCCCGGCATCGTCTA 7.569830
SigX sigX Syn -78..-106 TAAAACTTTTGCCTAGGCACAACGACTT 8.580150
SigX dltA Bsu -238..-210 TGAAACTTTTTGAGCATCTGATCGTCAA 11.938320
SigX dltA MtC -92..-63 GGGAACTTTCTGCCCGTTATGGCCGACTA 8.584440
SigX dltA EcZ -291..-263 TGCAACTGTCGGGCATGGTCGTCATCAA 7.601050
SigX lytR Bsu -118..-90 TGAAACTTTTTTTTATAAAAAACGACTA 11.647690
SigX lytR Bha -204..-232 TGAAACAAAAATAATTTTTGTCCAACAA 7.692270
SigX lytR Spy -172..-200 TAAAACCATAAATATCAGATTACGACAA 8.792200
SigX lytR Dra -200..-172 TGAAACTCGGGGCGGATGCCGGCGTCGT 9.431980
SigX yrhH Bsu -121..-92 TGAAACATTTTTCAATACATTGCCGTCTA 12.787410
SigX yrhH Bha -12..-41 TGAAACGTCAGCTCGTCTTGTTGCGTAAT 7.770850
SigX yrhH Cac -139..-110 TGGAACCGCGGAGTAAACTTCTGCCTCTA 7.565300
SigX yrhH Spn -252..-223 TGCAACGAGATTACCATGAGGGGCGTTTA 8.450140
SigX yrhH Cgl -40..-12 TGAAAATCCAACCATTTTAGGCCGACTA 8.541360
SigX yrhH Eco -203..-174 TGTCACAACTGAATGAAAAAAGGCGGCTA 7.405210
SigX yrhH EcZ -203..-174 TGTCACAACTGAATGAAAAAAGGCGGCTA 7.405210
SigX yrhH Ecs -203..-174 TGTCACAACTGAATGAAAAAAGGCGGCTA 7.405210
SigX yrhH Ype -287..-258 TAAAACCGCGGTATCACTGTTTCCCTCTA 7.674680
SigX yrhH Nme -139..-111 TGGTACTGTTTGACTGAAAAAGCGTCAA 7.902630
SigX yrhH NmA -139..-111 TGGTACTGTTTGACTGAAAAAGCGTCAA 7.902630
SigX yrhH Atu -91..-120 CGATACTGCATTCGGCTCGAAAACGTCAT 7.547820
SigX yrhH Sme -6..-35 TGGAACGTCACCTTCCGCTGTGTCGGCTA 8.298760
SigX yrhH Ccr -58..-29 TGAAACGCGTCCCCCGCCCTTCCCATCGA 7.386790
SigX yrhH Syn -167..-138 AGAAACTATTTTTAAAGCGATTTCTTCTA 7.980490
SigX ywoA Bsu -58..-29 TGAAACTTTTCATGAGTAAGATTAGTCTA 10.340580
SigX ywoA Spy -124..-95 TGTAACTCCACAACCGACAGTATAGTCTG 7.550570
SigX ywoA Pae -174..-203 GGAAACACAAGCGGCCTGCGGAGCGACTT 9.639080
SigX ywoA Hpy -105..-133 TGAAACCTTTAAAGGCTGACAACGCCAA 9.565450
SigX ywoA Bme -98..-70 TGAAACAAGCACATGGACCCGACGATAA 7.692270
SigX pssA Bsu -68..-40 TGTAACGCTATTCGATCACTATCGTCAA 11.442600
SigX pbpX Bsu -48..-20 TGAAACGTTAGTAGGTTAGTAACGTACA 7.386790
SigX pbpX Mtu -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.852730
SigX pbpX MtC -100..-72 TGCAACCATGTGAGCTCACCGCCGTCGC 7.852730
SigX rapD Bsu -80..-51 TGTAACCAACTGTCAATGAGAGCCGTCAA 11.442600
SigX rapD Bha -270..-298 TGCGACCTCAATCGGCAGAAATCGTCTA 9.042860
SigX rapD Ecs -234..-262 CGTAACAAAGAACGGAAACGGGCGGCAA 7.660280
SigX rapD Pae -121..-92 GGAAACGCGCAATTCTCCTACTTCGCCAA 8.617980
SigX rapD Nme -119..-147 TGAAACGCAAATCCGCTTCAGACGGCAT 8.504310
SigX rapD NmA -120..-148 TGAAACGCAAATCCGCTTCAGACGGCAT 8.504310
SigX rapD Rso -26..-55 TGTAGCCTGACCGCTACAATTGCCGTCTG 7.420210
SigX rapD Hpy -85..-114 TGCAACAACCAAAGGACTCCAAACGCCAA 8.334510
SigX rapD Sme -31..-2 CAAAACTTATTTCTCGCTCCGATCGTCTT 8.310420
SigX rapD Syn -113..-85 TGAACCGTAGTCAAAAGGCGATCGTCTT 9.149080
SigX rapD Nos -136..-108 CGATACCATCTTGATCTCTTTACGTCTT 8.396910
SigX rapD Dra -107..-136 TGAAAAAATGGCGAAGGTAAAACCGTCAT 7.770850