We searched for Xre binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for Xre.
| Xre |
xre |
Bsu |
-138..-153 |
GATACAAAATGTATC |
14.556290 |
| Xre |
xre |
Bha |
-19..-34 |
GATAAAAAGTGAAAC |
7.318810 |
| Xre |
xre |
Cac |
-147..-162 |
GATAAAAAAAGGAAG |
6.019060 |
| Xre |
xre |
Lla |
-151..-166 |
GGTACACGACGTATC |
7.101910 |
| Xre |
xre |
Spy |
-47..-62 |
AAAGCAAAAGGTATC |
6.357540 |
| Xre |
xre |
Spn |
-80..-95 |
GATACAAATTGTAGA |
8.099680 |
| Xre |
xre |
Sau |
-221..-236 |
GATATAAAATGAATC |
10.345060 |
| Xre |
xre |
Lin |
-210..-225 |
TAGACAAGATGTATC |
8.099680 |
| Xre |
xre |
Cgl |
-20..-5 |
GAAACAGGAGGTCTC |
6.439900 |
| Xre |
xre |
EcZ |
-60..-45 |
GATTCAAAATGTCAC |
8.601140 |
| Xre |
xre |
Ecs |
-60..-45 |
GATTCAAAATGTCAC |
8.601140 |
| Xre |
xre |
Hin |
-39..-24 |
GATATAAAATATTTC |
7.858550 |
| Xre |
xre |
Mlo |
-37..-22 |
TATACAAAATGTTGC |
8.099680 |
| Xre |
xre |
Ccr |
-76..-91 |
GATGCAAAAATCATC |
7.301390 |
| Xre |
xre |
Tma |
-41..-26 |
AATTCAAAAAGTATT |
6.799930 |
| Xre |
xre |
Fnu |
-98..-113 |
GATATAAAATATATA |
7.357090 |