Regulated Operon: ccpA-motPS

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ccpA graR, alsA - 3043207..3044211 transcriptional regulator (Lacl family) COG1609 ccpA-BAC ccpA-STA ccpA-STR  
ytxD motP - 3042326..3043144
COG1291  
ytxE motS - 3041608..3042336
COG1360  

Operon evidence: Northern blotting (2.7 kb transcript); downstream genes are on the opposite strand
Reference: Lapidus A, et al. (1997), Terahara N, et al. (2006), Genbank AF008220
Comments: The readthrough terminator downstream of ccpA leads to a 1.1 kb monocistronic ccpA transcript.

Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AAAAACGACCTCTTCGTAAAGGTCGTTTTTTACTTTGTTC
     >>>>>>        <<<<<<
3041602..3041621
-13..6
-9.1
 ytxE
AGAGCAAGCTTCACCTTTATGGTGAATTCTTGCTTTTTTCA
          >>>>>     <<<<<
3043173..3043187
20..34
-9.0
 ccpA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai