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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | hemAT |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| hemAT | yhfV | - | 1111924..1113222 | haem-based aerotactic transducer | COG0840 |
| Operon evidence: | Northern blotting (1.3 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2004), Genbank Y14084 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 1113273..1113321 | TCTGCAGCTTCATTCATGTTTCCCTTGGCCGATAAAAAAGAAAAAGGCT |
Serizawa M, et al. (2004): AR NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCGGTCTGCCATACGGCCGGTTTTTTTGCGTTCAT >>>>>> <<<<<< |
hemAT |
|