Regulated Operon: hemAT

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
hemAT yhfV - 1111924..1113222 haem-based aerotactic transducer COG0840  

Operon evidence: Northern blotting (1.3 kb transcript)
Reference: Serizawa M, et al. (2004), Genbank Y14084
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigD Promoter ND 1113273..1113321 TCTGCAGCTTCATTCATGTTTCCCTTGGCCGATAAAAAAGAAAAAGGCT Serizawa M, et al. (2004): AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCGGTCTGCCATACGGCCGGTTTTTTTGCGTTCAT
     >>>>>>        <<<<<<
1111894..1111913
11..30
-10.1
hemAT

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai