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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | mntABCD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| mntA | ytgA | - | 3144086..3145006 | manganese ABC transporter (membrane protein) | COG0803 | |
| mntB | ytgB | - | 3143315..3144067 | manganese ABC transporter (ATP-binding protein) | COG1121 | |
| mntC | ytgC | - | 3142002..3143309 | manganese ABC transporter (membrane protein) | COG1108 | |
| mntD | ytgD | - | 3141125..3142012 | manganese ABC transporter | COG1108 |
| Operon evidence: | Northern blotting (4.0 kb transcript) |
|---|---|
| Reference: | Que Q & Helmann JD (2000), Nickel M, et al. (2004) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| MntR | Positive at low Mn(II) concentration | ND | 3145118..3145137 | AATTTTGCATGAGGGAAACT |
Que Q & Helmann JD (2000): DB GS RG HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGAAAGAGCTGGCTGATGCAGCTCTTTCTTTTAATTATA >>>>>>>> <<<<<<< |
mntD |
|