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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | spoIIQ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| spoIIQ | ywnI | - | 3758724..3759575 | COG0739 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Londono-Vallejo JA, et al. (1997), Presecan E, et al. (1997), Genbank Y08559 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigF | Promoter | -40:+27 | 3759563..3759629 | AGGTTGTATATATTTTCAGAAAAGTGTTCAGAATGTTGCTGAGGTGATGAAACAATGAGAGAGGAAG |
Amaya EI & Piggot PJ (2001): PE Londono-Vallejo JA, et al. (1997): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAAACGTCTATCCTTGTGATGGGCGTTTTTTTCTGTTACT >>>>>>>> <<<<<<<< |
spoIIQ |
|