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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ybdO |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ybdO | + | 225052..226236 |
| Operon evidence: | Northern blotting (1.2 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2004), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 224982..225036 | TTTGAGGTTAATATATACATTATATTCGCCGATAAAAAAGAATAAGAGAGAATAC |
Serizawa M, et al. (2004): AR NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTAGGTAAGCTGTTCATGTAGGACAGCTTATTTTTTATGAGAATC >>>>>>>>>> <<<<<<<<<< |
ybdO |
|