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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yclNOPQ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yclN | + | 431940..432890 | COG4606 | yclN-BAC | ||
| yclO | + | 432883..433830 | COG4605 | |||
| yclP | + | 433824..434582 | COG4604 | |||
| yclQ | + | 434604..435557 | COG4607 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Baichoo N, et al. (2002) |
| Comments: | Northern blotting results in BSORF show a yclNOPQ (3.6 kb), a yclOPQ (2.6 kb), a yclPQ (1.7 kb), and a yclQ (1.0 kb) transcript. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 431831..431880 | GGTAATATGTAAATGATAATGATAATCAATTACTATATGGCCATATTGTT |
Baichoo N, et al. (2002): FT Ollinger J, et al. (2006): DB SDS-PAGE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAGCCTCCGCTAAATAGCGGGGCTCTTTTTTTGTTAATCA >>>>>>>>>>> <<<<<<<<<< |
yclQ |
|