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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ydbM |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ydbM | + | 504713..505858 | COG1960 |
| Operon evidence: | Genome analysis; downstream gene is on the opposite strand |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YrzC | Negative | ND | 504649..504712 | AAAAATGGCAGGAAATCTATAATACATATTAAATTTATCGGAATTAAAACTGGGGGGCTGCCGG |
Even S, et al. (2006): GS HM AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTGAGTCATAAAAAAAAGAGCCTTACCGGCTCTTTTTATGTATTGTT >>>>> <<<<< |
ydbM |
|