Regulated Operon: ydbN

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydbN
- 505883..506062

 

Operon evidence: Northern blotting (0.2 kb transcript); upstream and downstream gene are on the opposite strand
Reference: Baichoo N, et al. (2002), Reents H, et al. (2006), Genbank AB001488
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative ND 506188..506237 TACTGAAGTTAATTGATAATGATTATCAATATCGTTTGATTGGAGGTTGG Baichoo N, et al. (2002): FT

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGAGCCGGTAAGGCTCTTTTTTTTATGACTC
     >>>>>     <<<<<
505865..505879
4..18
-10.1
ydbN

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai