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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ydbN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ydbN | - | 505883..506062 |
| Operon evidence: | Northern blotting (0.2 kb transcript); upstream and downstream gene are on the opposite strand |
|---|---|
| Reference: | Baichoo N, et al. (2002), Reents H, et al. (2006), Genbank AB001488 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 506188..506237 | TACTGAAGTTAATTGATAATGATTATCAATATCGTTTGATTGGAGGTTGG |
Baichoo N, et al. (2002): FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAGCCGGTAAGGCTCTTTTTTTTATGACTC >>>>> <<<<< |
ydbN |
|