Regulated Operon: yfhC

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yfhC
+ 922923..923507
COG0778  

Operon evidence: downstream genes are on the opposite strand
Reference: Baichoo N, et al. (2002)
Comments: Northern blotting results in BSORF show a yfhB, a yfhC, and a yfhBC transcript.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative ND 922866..922915 TTCCGTTATCATTATGAAATGATAATCATTTTCAATTGCATAGGAAGGTG Baichoo N, et al. (2002): FT

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCCCTTGTCTCAAACGGAGACAAGGGGTTTTTCATTAACGAG
     >>>>>>>>>>>     <<<<<<<<<<<
923512..923538
5..31
-23.5
yfhC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai