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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yfhC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yfhC | + | 922923..923507 | COG0778 |
| Operon evidence: | downstream genes are on the opposite strand |
|---|---|
| Reference: | Baichoo N, et al. (2002) |
| Comments: | Northern blotting results in BSORF show a yfhB, a yfhC, and a yfhBC transcript. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 922866..922915 | TTCCGTTATCATTATGAAATGATAATCATTTTCAATTGCATAGGAAGGTG |
Baichoo N, et al. (2002): FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCCCTTGTCTCAAACGGAGACAAGGGGTTTTTCATTAACGAG >>>>>>>>>>> <<<<<<<<<<< |
yfhC |
|