Regulated Operon: yjbJ

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yjbJ
- 1234475..1235020
COG0741  

Operon evidence: Genome analysis
Reference: Serizawa M, et al. (2004)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigD Promoter ND 1235063..1235115 GCCCGCTTTCAAGTTTCAGTTCTTTGCTCAGCCAATATACAAACGGTCTGACA Serizawa M, et al. (2004): Master's thesis, Rho Ohnishi, Shinshu University

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGTAACCAGAGGTGCTCTTTCCCTCTGGTTTTTTTGCGAAGTG
     >>>>>>>         <<<<<<<
1234452..1234474
1..23
-11.8
yjbJ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai