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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yoaH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yoaH | - | 2028640..2030244 | COG0840 |
| Operon evidence: | Northern blotting (1.6 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2004), Genbank AF027868 |
| Comments: | Serizawa mentions that the terminator is downstream of yoaH; in the Genbank sequence, the terminator overlaps the gene. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 2030403..2030449 | TATCACTATAAAACTTGATAACACGTGTCGATATTATGGACATGAGC |
Serizawa M, et al. (2004): AR NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTTACGTGCAACCCCCATCTTATTCGGTGGGGGTTGGCTACTTTTACTGTGGTTGT >>>>>>>>>>>>>> <<<<<<<<<<<<< |
yoaH |
|