Regulated Operon: yoaH

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yoaH
- 2028640..2030244
COG0840  

Operon evidence: Northern blotting (1.6 kb transcript)
Reference: Serizawa M, et al. (2004), Genbank AF027868
Comments: Serizawa mentions that the terminator is downstream of yoaH; in the Genbank sequence, the terminator overlaps the gene.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigD Promoter ND 2030403..2030449 TATCACTATAAAACTTGATAACACGTGTCGATATTATGGACATGAGC Serizawa M, et al. (2004): AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CTTACGTGCAACCCCCATCTTATTCGGTGGGGGTTGGCTACTTTTACTGTGGTTGT
     >>>>>>>>>>>>>>      <<<<<<<<<<<<<
2028594..2028626
14..46
-22.6
yoaH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai