Regulated Operon: yphA-seaA

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yphA csfD - 2391948..2392547

 
seaA yphB - 2391058..2391951

 

Operon evidence: Genome analysis
Reference: Decatur A & Losick R (1996), Sorokin A, et al. (1996)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigF Promoter ND ND ND Decatur A & Losick R (1996): RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAATGAGTTAAGCCCTTCCTCTGAAGGGTTTCTTTTCATAAAA
            >>>>>>    <<<<<<
2390805..2390820
238..253
-8.8
seaA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai