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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yscB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yscB | + | 2952869..2953501 |
| Operon evidence: | Northern blotting (0.6 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2004) |
| Comments: | A 0.9 kb yscAB transcript was also detected. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 2952809..2952865 | AAGAAATGTAAAACAAAGTTAATCTCTGACCGATATAAGGAGCAGAAGGGAGCCTGA |
Serizawa M, et al. (2004): AR NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCCAAGGCATTCAGCCTTGGCTTATCCTCCGATCAG >>>>>>>> <<<<<<<< |
yscB |
|