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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ytfIJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ytfI | - | 3017817..3018497 | ||||
| ytfJ | - | 3017348..3017803 | COG3874 | ytfJ-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Lapidus A, et al. (1997), Wang S, et al. (2006), Genbank AF008220 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigF | Promoter | -38:+19 | 3018495..3018551 | CCGGGTTTATTTTTTTAGGAATTGGCGATAATGCTCCTAGAGGAAGTGAAGAATATG |
Wang S, et al. (2006): AR, Race-PCR Kuwana R, et al. (2002): SDS-PAGE, RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAGGTTAACTGCGCTGGCCGCAGTTAACTTTTTTTTGGCATAA >>>>>>>>>> <<<<<<<<<< |
ytfJ |
|