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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ytiP |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ytiP | pbuO | + | 3067957..3069255 | COG2252 |
| Operon evidence: | upstream and downstream genes are on the opposite strand |
|---|---|
| Reference: | Lapidus A, et al. (1997), Genbank AF008220 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PurR | Negative | ND | 3067898..3067951 | CAAATAAAACGAATAATATTAATGGTGTTTTGTTAAAACGTTCGTAATTGGAGG |
Saxild HH, et al. (2001): HM DB RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCCAAACGTCGCCGTTTGGGTTTTTTATGTAAACA >>>>>>>> <<<<<<<< |
ytiP |
|