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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yusV |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yusV | - | 3378139..3378966 | COG1120 | fecE-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Baichoo N, et al. (2002) |
| Comments: | Terminator partially overlaps the downstream yusU gene. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 3379101..3379148 | CCATAAAACTAATTGAAAATGATTTTCAAAGTCAGTGTTTTCTGCTAC |
Baichoo N, et al. (2002): FT |
| Fur | Negative | ND | 3379034..3379083 | CATATCAAATGGCTGAATATCGGAATCATTTGCATTGATGACAATTGACT |
Baichoo N, et al. (2002): FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAACGCAGCGAAGGAGCTTTCAATTGAGAAAGCTCCTTGCTGTTTTTTCGAAAGGAA >>>>>>>>>>>>>>>> <<<<<<<<<<<<<<< |
yusV |
|