 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yxaGH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yxaG | - | 4105268..4106281 | COG1917 | |||
| yxaH | - | 4103952..4105160 | COG2311 |
| Operon evidence: | Northern blotting (2.5 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (2004), Yoshida K, et al. (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| LmrA | Negative | ND | 4106288..4106357 | TCCTACAATTATATAGAACGGTCTAGACAAATGAATGATAATATATAGACTGGTCTAAATTGGAGGAAGC |
Yoshida K, et al. (2004): GS AR FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAAGTCTAGATGCCTATTGGCGTCTAGACTTTTTTCTATTATTT >>>>>>>>>>> <<<<<<<<<<< |
yxaH |
|